RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-228	ENST00000590347	POFUT1	Q9H488	388 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	ZMAT3	Q9HA38	289 aa	Known RBP	13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	SEBOX	Q9HB31	216 aa	Predicted RBP	13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	ANKRD20A5P	A0PJZ0	165 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	STX11	O75558	287 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	CD2	P06729	351 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	NME2	P22392	152 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	DCD	P81605	110 aa	Known RBP	13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	IRF4	Q15306	451 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	USF2	Q15853	346 aa	Predicted RBP	13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	LY6G6F	Q5SQ64	297 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	OR51A7	Q8NH64	312 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	IP6K3	Q96PC2	410 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	INSM2	Q96T92	566 aa	Predicted RBP	13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	SSX3	Q99909	188 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	MACROD1	Q9BQ69	325 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	XKR8	Q9H6D3	395 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	ANKRD10	Q9NXR5	420 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	CHD7	Q9P2D1	2997 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	RFPL4A	A6NLU0	287 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	EEF1E1-BLOC1S5	C9J1V9	151 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	RFPL4AL1	F8VTS6	287 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	SULT2B1	O00204	365 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	C8G	P07360	202 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	ZDHHC11B	P0C7U3	371 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	AGER	Q15109	404 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	UBE2NL	Q5JXB2	153 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	ZNF697	Q5TEC3	545 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	FUT10	Q6P4F1	479 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.97	□□□□□ -0.17	2e-8	■□□□□ 8.6
CIRBP-228	ENST00000590347	CAMKMT	Q7Z624	323 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	ZNF761	Q86XN6	746 aa	Predicted RBP	13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	SLC44A3	Q8N4M1	653 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	ARRDC1	Q8N5I2	433 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	FAM24B	Q8N5W8	94 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	ZDHHC12	Q96GR4	267 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	F2RL3	Q96RI0	385 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	ATG101	Q9BSB4	218 aa		13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	EXOG	Q9Y2C4	368 aa	Known RBP	13.97	□□□□□ -0.17
CIRBP-228	ENST00000590347	ERAL1	O75616	437 aa	Known RBP	13.96	□□□□□ -0.17
CIRBP-228	ENST00000590347	CD3D	P04234	171 aa		13.96	□□□□□ -0.17
CIRBP-228	ENST00000590347	CKM	P06732	381 aa		13.96	□□□□□ -0.17
CIRBP-228	ENST00000590347	RHO	P08100	348 aa		13.96	□□□□□ -0.17
CIRBP-228	ENST00000590347	TYR	P14679	529 aa		13.96	□□□□□ -0.17
CIRBP-228	ENST00000590347	CST5	P28325	142 aa	Predicted RBP	13.96	□□□□□ -0.17
CIRBP-228	ENST00000590347	CD1C	P29017	333 aa		13.96	□□□□□ -0.17
CIRBP-228	ENST00000590347	IMPA1	P29218	277 aa		13.96	□□□□□ -0.17
CIRBP-228	ENST00000590347	OR1D2	P34982	312 aa		13.96	□□□□□ -0.17
CIRBP-228	ENST00000590347	GPR143	P51810	404 aa		13.96	□□□□□ -0.17
CIRBP-228	ENST00000590347	RAB2A	P61019	212 aa		13.96	□□□□□ -0.17
CIRBP-228	ENST00000590347	TSPAN31	Q12999	210 aa		13.96	□□□□□ -0.17
CIRBP-228	ENST00000590347	AMER3	Q8N944	861 aa		13.96	□□□□□ -0.17
CIRBP-228	ENST00000590347	PIGX	Q8TBF5	258 aa		13.96	□□□□□ -0.17
CIRBP-228	ENST00000590347	GAREM1	Q9H706	876 aa		13.96	□□□□□ -0.17
CIRBP-228	ENST00000590347	GNG8	Q9UK08	70 aa		13.96	□□□□□ -0.17
CIRBP-228	ENST00000590347	FAM171A2	A8MVW0	826 aa		13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347		H7C1Q1	480 aa		13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	RPP14	O95059	124 aa	Known RBP	13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	EOMES	O95936	686 aa		13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	IL9	P15248	144 aa		13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	SELP	P16109	830 aa		13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	CD80	P33681	288 aa		13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	SHC2	P98077	582 aa		13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	MAPK14	Q16539	360 aa		13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	PRPF38B	Q5VTL8	546 aa	Known RBP	13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	NIPAL3	Q6P499	406 aa		13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	TPGS1	Q6ZTW0	290 aa		13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	ADCK2	Q7Z695	626 aa		13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	OR2T33	Q8NG76	320 aa		13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	CASTOR1	Q8WTX7	329 aa		13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	PPP1R1C	Q8WVI7	109 aa		13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	AKR1E2	Q96JD6	320 aa		13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	NECAB3	Q96P71	396 aa	Predicted RBP	13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	SLC13A4	Q9UKG4	626 aa		13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	ACAD8	Q9UKU7	415 aa		13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	NOP16	Q9Y3C1	178 aa	Known RBP	13.96	□□□□□ -0.18
CIRBP-228	ENST00000590347	TRBV2	A0A0J9YWF9	115 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347		A0A1B0GV50	99 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	TMEM82	A0PJX8	343 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	RNF222	A6NCQ9	220 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	RHPN2P1	A8MT19	583 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347		H0YIV9	168 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	IMPA2	O14732	288 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	SAG	P10523	405 aa	Predicted RBP	13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	SPI1	P17947	270 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	LAP3	P28838	519 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	OMP	P47874	163 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	ZNF85	Q03923	595 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	NDUFA9	Q16795	377 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	SDR9C7	Q8NEX9	313 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	OR1J2	Q8NGS2	313 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	PRRC1	Q96M27	445 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	MARCH5	Q9NX47	278 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	ZDHHC3	Q9NYG2	299 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	SLC27A6	Q9Y2P4	619 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	SNRPGP15	A8MWD9	76 aa		13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	TERT	O14746	1132 aa	Known RBP	13.95	□□□□□ -0.18
CIRBP-228	ENST00000590347	GSTZ1	O43708	216 aa	Predicted RBP	13.95	□□□□□ -0.18

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