RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 KCTD20Q7Z5Y7 419 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 LRRC75AQ8NAA5 344 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 HAVCR2Q8TDQ0 301 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 SLC41A2Q96JW4 573 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 GAL3ST4Q96RP7 486 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 DPYSL5Q9BPU6 564 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 ALG12Q9BV10 488 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 NUDT9Q9BW91 350 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 ADAM19Q9H013 955 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 B3GAT2Q9NPZ5 323 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 ABRACLQ9P1F3 81 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 A0A0G2JK05 382 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 OR6C76A6NM76 312 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 NOTOA8MTQ0 251 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 BCAT2O15382 392 aaPredicted RBP17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 FLRT2O43155 660 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 PRKNO60260 465 aaPredicted RBP17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 TACSTD2P09758 323 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 ASAH2BP0C7U1 165 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 HLA-DMAP28067 261 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 SDHAP31040 664 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 PITPNBP48739 271 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 NSDHLQ15738 373 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 WDR45BQ5MNZ6 344 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 SNAP47Q5SQN1 464 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 ATAD3CQ5T2N8 411 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 ZNF57Q68EA5 555 aaPredicted RBP17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 SLC6A19Q695T7 634 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 SLC29A4Q7RTT9 530 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 OVCH1Q7RTY7 1134 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 PRSS42Q7Z5A4 293 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 RFLNBQ8N5W9 214 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 TRMT10AQ8TBZ6 339 aaKnown RBP17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 Q96M85 177 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 CTRCQ99895 268 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 HDHD2Q9H0R4 259 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 RXFP3Q9NSD7 469 aa17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 TP53BP1Q12888 1972 aaPredicted RBP17.47■□□□□ 0.39
PRKCSH-209ENST00000589838 ANKRD61A6NGH8 418 aa17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 ZNF879B4DU55 563 aa17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 SELENOFO60613 162 aa17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 CPNE3O75131 537 aaKnown RBP17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 UCHL1P09936 223 aa17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 TACR3P29371 465 aa17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 MRPL28Q13084 256 aaKnown RBP17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 EBPQ15125 230 aaKnown RBP17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 GXYLT1Q4G148 440 aa17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 ARHGAP40Q5TG30 622 aa17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 GPR139Q6DWJ6 353 aa17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 PYHIN1Q6K0P9 492 aa17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 SLC16A9Q7RTY1 509 aa17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 FAM122BQ7Z309 247 aa17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 NANOGNBQ7Z5D8 188 aa17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 OR4M1Q8NGD0 313 aa17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 ZNF486Q96H40 463 aaPredicted RBP17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 ZCCHC4Q9H5U6 513 aa17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 FKRPQ9H9S5 495 aa17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 GRHPRQ9UBQ7 328 aa17.46■□□□□ 0.39
PRKCSH-209ENST00000589838 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 A0A0G2JMP0 313 aa17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 A0A0X1KG70 313 aa17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 A0A1B0GX78 115 aa17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 ICOSLGO75144 302 aa17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 EIF4EP06730 217 aaKnown RBP17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 PSKH1P11801 424 aa17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 CXCR1P25024 350 aa17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 UQCRC1P31930 480 aa17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 CDKN2AP42771 156 aaKnown RBP17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 OR10A3P58181 314 aa17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 WDR74Q6RFH5 385 aaPredicted RBP17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 UNQ9370/PRO34162Q6UXP9 181 aa17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 SLC35F3Q8IY50 421 aa17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 OR4M2Q8NGB6 313 aa17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 RFT1Q96AA3 541 aa17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 MOGAT1Q96PD6 335 aa17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 TTTY10Q9BZA0 68 aa17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 OR2B2Q9GZK3 357 aa17.46■□□□□ 0.38
PRKCSH-209ENST00000589838 NDUFB5O43674 189 aa17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 CDC40O60508 579 aaKnown RBP eCLIP17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 TSPAN2O60636 221 aa17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 TMEM127O75204 238 aa17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 TRIM3O75382 744 aaPredicted RBP17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 FOLR1P15328 257 aa17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 PGCP20142 388 aa17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 NR0B1P51843 470 aaKnown RBP17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 PNLIPRP2P54317 469 aa17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 CFHR1Q03591 330 aa17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 EGR4Q05215 589 aa17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 ZP2Q05996 745 aa17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 PLCXD2Q0VAA5 305 aa17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 CCDC85BQ15834 202 aaPredicted RBP17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 TBRG1Q3YBR2 411 aa17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 LINC01590Q5TEZ4 76 aa17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 PRR22Q8IZ63 422 aa17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 GHDCQ8N2G8 530 aa17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 UBE2J2Q8N2K1 259 aa17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 Q8N9G6 341 aaPredicted RBP17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 LSM14AQ8ND56 463 aaKnown RBP17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 OR1N1Q8NGS0 311 aa17.45■□□□□ 0.38
PRKCSH-209ENST00000589838 ZNRF4Q8WWF5 429 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms