RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 HOXC5Q00444 222 aa9.23□□□□□ -0.93
SDF2-208ENST00000589788 FAM27E3Q08E93 113 aa9.23□□□□□ -0.93
SDF2-208ENST00000589788 RASGEF1BQ0VAM2 473 aa9.23□□□□□ -0.93
SDF2-208ENST00000589788 INTS11Q5TA45 600 aaKnown RBP9.23□□□□□ -0.93
SDF2-208ENST00000589788 NANOGP8Q6NSW7 305 aa9.23□□□□□ -0.93
SDF2-208ENST00000589788 ZNF474Q6S9Z5 364 aaPredicted RBP9.23□□□□□ -0.93
SDF2-208ENST00000589788 BEND4Q6ZU67 534 aa9.23□□□□□ -0.93
SDF2-208ENST00000589788 PTOV1Q86YD1 416 aa9.23□□□□□ -0.93
SDF2-208ENST00000589788 TUSC5Q8IXB3 177 aa9.23□□□□□ -0.93
SDF2-208ENST00000589788 ARHGAP24Q8N264 748 aa9.23□□□□□ -0.93
SDF2-208ENST00000589788 LILRB2Q8N423 598 aa9.23□□□□□ -0.93
SDF2-208ENST00000589788 LURAP1Q96LR2 239 aa9.23□□□□□ -0.93
SDF2-208ENST00000589788 ECSITQ9BQ95 431 aa9.23□□□□□ -0.93
SDF2-208ENST00000589788 CADM1Q9BY67 442 aaKnown RBP9.23□□□□□ -0.93
SDF2-208ENST00000589788 MMADHCQ9H3L0 296 aaPredicted RBP9.23□□□□□ -0.93
SDF2-208ENST00000589788 NANOGQ9H9S0 305 aa9.23□□□□□ -0.93
SDF2-208ENST00000589788 ABCD2Q9UBJ2 740 aa9.23□□□□□ -0.93
SDF2-208ENST00000589788 TRAPPC4Q9Y296 219 aa9.23□□□□□ -0.93
SDF2-208ENST00000589788 AP3M1Q9Y2T2 418 aa9.23□□□□□ -0.93
SDF2-208ENST00000589788 CHST2Q9Y4C5 530 aa9.23□□□□□ -0.93
SDF2-208ENST00000589788 SH3D21A4FU49 640 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 C16orf97H3BN30 126 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 NME4O00746 187 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 DNPH1O43598 174 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 TPST1O60507 370 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 EIF1BO60739 113 aaKnown RBP9.22□□□□□ -0.93
SDF2-208ENST00000589788 CYTIPO60759 359 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 PCGF2P35227 344 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 IDUAP35475 653 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 UGT2B10P36537 528 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 SLC7A2P52569 658 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 RGS8P57771 180 aaPredicted RBP9.22□□□□□ -0.93
SDF2-208ENST00000589788 SPATS1Q496A3 300 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 RABL3Q5HYI8 236 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 NET1Q7Z628 596 aaPredicted RBP9.22□□□□□ -0.93
SDF2-208ENST00000589788 PATL1Q86TB9 770 aaKnown RBP9.22□□□□□ -0.93
SDF2-208ENST00000589788 SLC15A3Q8IY34 581 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 OR52E4Q8NGH9 312 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 PIGXQ8TBF5 258 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 SLC26A7Q8TE54 656 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 UTP4Q969X6 686 aaKnown RBP9.22□□□□□ -0.93
SDF2-208ENST00000589788 MCUR1Q96AQ8 359 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 DACH2Q96NX9 599 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 PSD2Q9BQI7 771 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 NAA11Q9BSU3 229 aaPredicted RBP9.22□□□□□ -0.93
SDF2-208ENST00000589788 MED18Q9BUE0 208 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 POTEKPQ9BYX7 375 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 KLHL4Q9C0H6 718 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 EVA1AQ9H8M9 152 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 BCO1Q9HAY6 547 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 SELENONQ9NZV5 590 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 EMC3Q9P0I2 261 aa9.22□□□□□ -0.93
SDF2-208ENST00000589788 ZC3H12DA2A288 527 aaKnown RBP9.21□□□□□ -0.94
SDF2-208ENST00000589788 A6NNC1 897 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 A8MVM7 634 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 M0QX08 132 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 MFN2O95140 757 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 OPN1SWP03999 348 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 GPIP06744 558 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 KLK2P20151 261 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 FPR1P21462 350 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 PCBP3P57721 371 aaKnown RBP9.21□□□□□ -0.94
SDF2-208ENST00000589788 KRTAP10-9P60411 292 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 DMTNQ08495 405 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 BNIP2Q12982 314 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 DAZAP2Q15038 168 aaPredicted RBP9.21□□□□□ -0.94
SDF2-208ENST00000589788 VMACQ2NL98 169 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 GLIPR1L2Q4G1C9 344 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 SAMD4BQ5PRF9 694 aaKnown RBP9.21□□□□□ -0.94
SDF2-208ENST00000589788 ABLIM2Q6H8Q1 611 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 ERICH5Q6P6B1 374 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 SPATC1Q76KD6 591 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 NUFIP2Q7Z417 695 aaKnown RBP9.21□□□□□ -0.94
SDF2-208ENST00000589788 RANBP3LQ86VV4 465 aaPredicted RBP9.21□□□□□ -0.94
SDF2-208ENST00000589788 ZNF100Q8IYN0 542 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 SMYD1Q8NB12 490 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 DNAJA4Q8WW22 397 aaPredicted RBP9.21□□□□□ -0.94
SDF2-208ENST00000589788 C3orf49Q96BT1 292 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 ZNF300Q96RE9 604 aaPredicted RBP9.21□□□□□ -0.94
SDF2-208ENST00000589788 CDRT15Q96T59 188 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 THTPAQ9BU02 230 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 TAPBPLQ9BX59 468 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 POLDIP3Q9BY77 421 aaKnown RBP9.21□□□□□ -0.94
SDF2-208ENST00000589788 TRIM2Q9C040 744 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 TMEM27Q9HBJ8 222 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 CMTM6Q9NX76 183 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 ADA2Q9NZK5 511 aa9.21□□□□□ -0.94
SDF2-208ENST00000589788 TESQ9UGI8 421 aaKnown RBP9.21□□□□□ -0.94
SDF2-208ENST00000589788 A0A1B0GWA3 101 aa9.2□□□□□ -0.94
SDF2-208ENST00000589788 ZNF724A8MTY0 619 aa9.2□□□□□ -0.94
SDF2-208ENST00000589788 GPR171O14626 319 aa9.2□□□□□ -0.94
SDF2-208ENST00000589788 CTAG2O75638 210 aa9.2□□□□□ -0.94
SDF2-208ENST00000589788 GOSR1O95249 250 aa9.2□□□□□ -0.94
SDF2-208ENST00000589788 AHSA1O95433 338 aa9.2□□□□□ -0.94
SDF2-208ENST00000589788 PNMTP11086 282 aa9.2□□□□□ -0.94
SDF2-208ENST00000589788 HSD17B1P14061 328 aa9.2□□□□□ -0.94
SDF2-208ENST00000589788 GZMMP51124 257 aa9.2□□□□□ -0.94
SDF2-208ENST00000589788 CEACAM7Q14002 265 aa9.2□□□□□ -0.94
SDF2-208ENST00000589788 PDK3Q15120 406 aa9.2□□□□□ -0.94
SDF2-208ENST00000589788 OR7A5Q15622 319 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms