RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ZNF587Q96SQ5 575 aaPredicted RBP16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 FUZQ9BT04 418 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 KLHL4Q9C0H6 718 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 CCM2LQ9NUG4 571 aaPredicted RBP16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 COQ3Q9NZJ6 369 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 C6orf203Q9P0P8 240 aaPredicted RBP16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 A0A1W2PNV4 684 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 ERICH4A6NGS2 130 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 ZNF716A6NP11 495 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 SS18L1O75177 396 aaPredicted RBP16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 FKBP6O75344 327 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 CTSSP25774 331 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 CHRNB4P30926 498 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 SMIM11AP58511 58 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 SIRPAP78324 504 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 KPNB1Q14974 876 aaKnown RBP16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 MFSD13AQ14CX5 517 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 CDSNQ15517 529 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 MBOAT2Q6ZWT7 520 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 MRGPRGQ86SM5 289 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 MEX3DQ86XN8 651 aaKnown RBP16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 LIX1LQ8IVB5 337 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 LRRC17Q8N6Y2 441 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 PAPD5Q8NDF8 572 aaKnown RBP16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 PIGXQ8TBF5 258 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 SGTBQ96EQ0 304 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 GMPPAQ96IJ6 420 aaPredicted RBP16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 VNN3Q9NY84 501 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 KLHL9Q9P2J3 617 aa16.91■□□□□ 0.3
CLPTM1-209ENST00000588855 TNFSF13O75888 250 aa16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 MT-ATP6P00846 226 aa16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 IGF2P01344 180 aa16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 IFI30P13284 250 aa16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 KIR2DL2P43627 348 aaPredicted RBP16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 ACTR3P61158 418 aa16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 GTF2IRD2BQ6EKJ0 949 aa16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 VWA1Q6PCB0 445 aa16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 MAMDC2Q7Z304 686 aaPredicted RBP16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 GTF2IRD2Q86UP8 949 aa16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 TUSC5Q8IXB3 177 aa16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 ZNF808Q8N4W9 903 aaPredicted RBP16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 CNEP1R1Q8N9A8 125 aa16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 ASPNQ9BXN1 380 aa16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 FKRPQ9H9S5 495 aa16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 CHST11Q9NPF2 352 aa16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 NANSQ9NR45 359 aa16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 GLRX2Q9NS18 164 aa16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 CORINQ9Y5Q5 1042 aa16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 LYVE1Q9Y5Y7 322 aa16.9■□□□□ 0.3
CLPTM1-209ENST00000588855 CACNA1CQ13936 2221 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 SPTBN1Q01082 2364 aaKnown RBP16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 SH3PXD2BA1X283 911 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 WIPF3A6NGB9 483 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 OR7A10O76100 309 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 CST1P01037 141 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 CRHP06850 196 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 HOXB6P17509 224 aaKnown RBP16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 FUT1P19526 365 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 BMP5P22003 454 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 AGTR1P30556 359 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 LIMS1P48059 325 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 CTBP2P56545 445 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 PRKCDQ05655 676 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 PPP1R8Q12972 351 aaKnown RBP16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 EXOC3L2Q2M3D2 409 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 OR2T5Q6IEZ7 315 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 FAM214BQ7L5A3 538 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 RNF113BQ8IZP6 322 aaKnown RBP16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 KDM8Q8N371 416 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 SCAIQ8N9R8 606 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 RELL2Q8NC24 303 aaPredicted RBP16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 OR2T29Q8NH02 315 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 SSC4DQ8WTU2 575 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 ASB5Q8WWX0 329 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 ZNF775Q96BV0 537 aaPredicted RBP16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 BPIFA2Q96DR5 249 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 ALPK1Q96QP1 1244 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 SFXN3Q9BWM7 321 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 BCO1Q9HAY6 547 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 MRPL39Q9NYK5 338 aaKnown RBP16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 ZNF229Q9UJW7 825 aa16.89■□□□□ 0.29
CLPTM1-209ENST00000588855 IGKV3D-15A0A087WSY6 115 aa16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 ANKRD65E5RJM6 399 aa16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 TNFRSF11BO00300 401 aa16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 KRT36O76013 467 aa16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 ASAH2BP0C7U1 165 aa16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 MAKP20794 623 aa16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 SLC16A1P53985 500 aa16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 SLC17A1Q14916 467 aa16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 TMEM225Q6GV28 225 aa16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 H1FNTQ75WM6 255 aaPredicted RBP16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 RRM2BQ7LG56 351 aa16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 GPAT4Q86UL3 456 aa16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 ADPRHL1Q8NDY3 354 aa16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 OR4K5Q8NGD3 323 aa16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 OR4C15Q8NGM1 316 aa16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 OR5J2Q8NH18 312 aa16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 DENND2DQ9H6A0 471 aaPredicted RBP16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 YY1AP1Q9H869 796 aa16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 GP6Q9HCN6 339 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms