RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 ZP4Q12836 540 aa9.53□□□□□ -0.88
NEDD4L-224ENST00000588712 TMEM176BQ3YBM2 270 aaPredicted RBP9.53□□□□□ -0.88
NEDD4L-224ENST00000588712 GPR139Q6DWJ6 353 aa9.53□□□□□ -0.88
NEDD4L-224ENST00000588712 ACSM5Q6NUN0 579 aa9.53□□□□□ -0.88
NEDD4L-224ENST00000588712 FAM109AQ8N4B1 249 aa9.53□□□□□ -0.88
NEDD4L-224ENST00000588712 LRRC17Q8N6Y2 441 aa9.53□□□□□ -0.88
NEDD4L-224ENST00000588712 ADPRHL1Q8NDY3 354 aa9.53□□□□□ -0.88
NEDD4L-224ENST00000588712 ATP6V1C2Q8NEY4 427 aa9.53□□□□□ -0.88
NEDD4L-224ENST00000588712 OR8D4Q8NGM9 314 aa9.53□□□□□ -0.88
NEDD4L-224ENST00000588712 ZHX1-C8orf76Q96EF9 292 aa9.53□□□□□ -0.88
NEDD4L-224ENST00000588712 SFXN2Q96NB2 322 aa9.53□□□□□ -0.88
NEDD4L-224ENST00000588712 DCBLD2Q96PD2 775 aa9.53□□□□□ -0.88
NEDD4L-224ENST00000588712 ZNF703Q9H7S9 590 aaPredicted RBP9.53□□□□□ -0.88
NEDD4L-224ENST00000588712 TIGARQ9NQ88 270 aa9.53□□□□□ -0.88
NEDD4L-224ENST00000588712 H2AFY2Q9P0M6 372 aaPredicted RBP9.53□□□□□ -0.88
NEDD4L-224ENST00000588712 CNTRLQ7Z7A1 2325 aa9.53□□□□□ -0.88
NEDD4L-224ENST00000588712 A0A0G2JMM0 328 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 A0A1W2PPB8 328 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 A0A1W2PRS3 328 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 ZC3H12DA2A288 527 aaKnown RBP9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 KIR3DP1A8MWS1 328 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 FTCDNL1E5RQL4 147 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 H3BML4 177 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 SURF4O15260 269 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 TLX2O43763 284 aaPredicted RBP9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 EFNA2O43921 213 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 ITGB2P05107 769 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 CD14P08571 375 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 IGFBP1P08833 259 aaPredicted RBP9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 GABRB1P18505 474 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 UQCRC1P31930 480 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 EFNB1P98172 346 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 LTBQ06643 244 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 MYBPHQ13203 477 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 FHL1Q13642 323 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 SLC10A1Q14973 349 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 TMEM201Q5SNT2 666 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 SLC6A19Q695T7 634 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 TMPPEQ6ZT21 453 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 ESPNLQ6ZVH7 1005 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 CCDC71Q8IV32 467 aaPredicted RBP9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 TCEANCQ8N8B7 351 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 TMEM163Q8TC26 289 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 MIB2Q96AX9 1013 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 OR5B2Q96R09 309 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 NAA11Q9BSU3 229 aaPredicted RBP9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 OR11A1Q9GZK7 315 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 FANCFQ9NPI8 374 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 CMC2Q9NRP2 79 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 ZNF226Q9NYT6 803 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 RPL36Q9Y3U8 105 aaKnown RBP9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 HRH3Q9Y5N1 445 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 SPTBN2O15020 2390 aa9.52□□□□□ -0.88
NEDD4L-224ENST00000588712 A0A087WXM4 84 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 PINLYPA6NC86 204 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 NPIPB13A6NJU9 1138 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 NPIPB4C9JG80 1138 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 SULT2B1O00204 365 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 PLPP3O14495 311 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 VAMP5O95183 116 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 RFPL3SP0C7P2 107 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 ADORA3P0DMS8 318 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 ZNF24P17028 368 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 ZNF3P17036 446 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 CRHBPP24387 322 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 EEF1B2P24534 225 aaKnown RBP9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 GRPRP30550 384 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 RANBP1P43487 201 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 FXYD6P3P58550 94 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 PPIAP62937 165 aaKnown RBP9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 RPL18Q07020 188 aaKnown RBP9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 OR7A5Q15622 319 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 BCL2A1Q16548 175 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 CTU2Q2VPK5 515 aaKnown RBP9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 C1QL3Q5VWW1 255 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 IQCF1Q8N6M8 205 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 ANKK1Q8NFD2 765 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 BPIFB6Q8NFQ5 453 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 TSPAN14Q8NG11 270 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 OR4Q3Q8NH05 313 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 CNIH3Q8TBE1 160 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 MYDGFQ969H8 173 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 ARL5BQ96KC2 179 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 ERMAPQ96PL5 475 aaPredicted RBP9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 CHST11Q9NPF2 352 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 INIPQ9NRY2 104 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 PAQR5Q9NXK6 330 aaPredicted RBP9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 TAS2R5Q9NYW4 299 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 GRHPRQ9UBQ7 328 aa9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.52□□□□□ -0.89
NEDD4L-224ENST00000588712 A0A087WV48 116 aa9.51□□□□□ -0.89
NEDD4L-224ENST00000588712 LOC102725191A0A1B0GVB3 256 aa9.51□□□□□ -0.89
NEDD4L-224ENST00000588712 A0A1W2PRG6 482 aa9.51□□□□□ -0.89
NEDD4L-224ENST00000588712 TMEM8BA6NDV4 472 aa9.51□□□□□ -0.89
NEDD4L-224ENST00000588712 EFCAB10A6NFE3 127 aa9.51□□□□□ -0.89
NEDD4L-224ENST00000588712 TRIM64A6NGJ6 449 aa9.51□□□□□ -0.89
NEDD4L-224ENST00000588712 LRRN3E7EW58 273 aa9.51□□□□□ -0.89
NEDD4L-224ENST00000588712 SLC1A7O00341 560 aa9.51□□□□□ -0.89
NEDD4L-224ENST00000588712 RNF13O43567 381 aa9.51□□□□□ -0.89
NEDD4L-224ENST00000588712 TXNDC12O95881 172 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms