RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	DNM1P46	Q6ZS02	220 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	ACOT7L	Q6ZUV0	252 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	STXBP4	Q6ZWJ1	553 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	PGAP1	Q75T13	922 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	PSTK	Q8IV42	348 aa	Known RBP	4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	CADM2	Q8N3J6	435 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	OR4F6	Q8NGB9	312 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	DNAJA4	Q8WW22	397 aa	Predicted RBP	4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	PLEKHA8	Q96JA3	519 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	OXGR1	Q96P68	337 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	NMUR2	Q9GZQ4	415 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	TMEM185B	Q9H7F4	350 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	ANKRA2	Q9H9E1	313 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	THUMPD1	Q9NXG2	353 aa	Known RBP	4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	RSPH14	Q9UHP6	348 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	ZMYM4	Q5VZL5	1548 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	ABCA10	Q8WWZ4	1543 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	UNC13B	O14795	1591 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	NPHP4	O75161	1426 aa	Predicted RBP	4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009		A0A087WWV3	80 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009		A0A1B0GU03	582 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	CCDC182	A6NF36	153 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009		C9JVG2	144 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	GFY	I3L273	518 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	DCTN6	O00399	190 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	CDH16	O75309	829 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	NPR2	P20594	1047 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	MT3	P25713	68 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	SHC1	P29353	583 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	CDH6	P55285	790 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	BID	P55957	195 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	SCRN3	Q0VDG4	424 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	CCDC173	Q0VFZ6	552 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	OR5I1	Q13606	314 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	AANAT	Q16613	207 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	GPRC6A	Q5T6X5	926 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	OLFML2A	Q68BL7	652 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	OR52E8	Q6IFG1	317 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	HSDL2	Q6YN16	418 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	BZW1	Q7L1Q6	419 aa	Known RBP	4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	BIVM	Q86UB2	503 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	NUDCD3	Q8IVD9	361 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	SKA3	Q8IX90	412 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	TPRX1	Q8N7U7	411 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	BBOF1	Q8ND07	529 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	ZPLD1	Q8TCW7	415 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	MCUR1	Q96AQ8	359 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	C1orf147	Q96MC9	270 aa	Predicted RBP	4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	MBOAT4	Q96T53	435 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	GAL3ST1	Q99999	423 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	KLHDC3	Q9BQ90	382 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	CRLF2	Q9HC73	371 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	HOXC10	Q9NYD6	342 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	PAK5	Q9P286	719 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	STARD10	Q9Y365	291 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	RPL36	Q9Y3U8	105 aa	Known RBP	4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	CNTNAP2	Q9UHC6	1331 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	SYNRG	Q9UMZ2	1314 aa		4.16	□□□□□ -1.74
TUBD1-208	ENST00000588009	NRK	Q7Z2Y5	1582 aa		4.15	□□□□□ -1.74
TUBD1-208	ENST00000588009	WRB	O00258	174 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	HIP1	O00291	1037 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	UGT1A9	O60656	530 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	ZNF354A	O60765	605 aa	Predicted RBP	4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	STAMBP	O95630	424 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	KRT6A	P02538	564 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	CT62	P0C5K7	136 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	GZMA	P12544	262 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	IL12A	P29459	219 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	FDFT1	P37268	417 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	ARL6IP1	Q15041	203 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	PRR4	Q16378	134 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	DGUOK	Q16854	277 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	LRRC36	Q1X8D7	754 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	ALKBH6	Q3KRA9	238 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	SBK1	Q52WX2	424 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	OR2B11	Q5JQS5	317 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	OR2G6	Q5TZ20	316 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	CGB2	Q6NT52	195 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	CLEC2A	Q6UVW9	174 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	C19orf35	Q6ZS72	473 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	MAPK1IP1L	Q8NDC0	245 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	OR4C5	Q8NGB2	326 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	OR4K14	Q8NGD5	310 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	FAM81A	Q8TBF8	368 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	SLC22A8	Q8TCC7	542 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	GTSF1	Q8WW33	167 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	STARD8	Q92502	1023 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	ELMO1	Q92556	727 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	PAGE5	Q96GU1	130 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	PGLYRP4	Q96LB8	373 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	TSNARE1	Q96NA8	513 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	PANX1	Q96RD7	426 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	C11orf70	Q9BRQ4	267 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	STAP1	Q9ULZ2	295 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	KCNIP3	Q9Y2W7	256 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	LRRC9	Q6ZRR7	1453 aa		4.15	□□□□□ -1.75
TUBD1-208	ENST00000588009	MAGI2	Q86UL8	1455 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms