RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 KLF10Q13118 480 aa17.61■□□□□ 0.41
TRAPPC6A-203ENST00000587818 OR1Q1Q15612 314 aa17.61■□□□□ 0.41
TRAPPC6A-203ENST00000587818 DUSP7Q16829 419 aa17.61■□□□□ 0.41
TRAPPC6A-203ENST00000587818 ALG10BQ5I7T1 473 aa17.61■□□□□ 0.41
TRAPPC6A-203ENST00000587818 YTHDF3Q7Z739 585 aaKnown RBP17.61■□□□□ 0.41
TRAPPC6A-203ENST00000587818 P2RY8Q86VZ1 359 aa17.61■□□□□ 0.41
TRAPPC6A-203ENST00000587818 LSMEM1Q8N8F7 131 aa17.61■□□□□ 0.41
TRAPPC6A-203ENST00000587818 WDR31Q8NA23 367 aa17.61■□□□□ 0.41
TRAPPC6A-203ENST00000587818 TMEM45BQ96B21 275 aa17.61■□□□□ 0.41
TRAPPC6A-203ENST00000587818 Q96MF0 132 aa17.61■□□□□ 0.41
TRAPPC6A-203ENST00000587818 TMEM27Q9HBJ8 222 aa17.61■□□□□ 0.41
TRAPPC6A-203ENST00000587818 SLC25A15Q9Y619 301 aa17.61■□□□□ 0.41
TRAPPC6A-203ENST00000587818 IGKV1D-42A0A075B6H8 117 aa17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 LOC100653049A0A140TA62 436 aa17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 M0R3H8 397 aa17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 ABCD4O14678 606 aa17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 KRT34O76011 436 aa17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 SOD3P08294 240 aa17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 PCBP3P57721 371 aaKnown RBP17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 ZNF672Q499Z4 452 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 NANOGP8Q6NSW7 305 aa17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 NIPAL3Q6P499 406 aa17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 C6orf89Q6UWU4 347 aa17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 Q71RC1 249 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 CIARTQ8N365 385 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 GPR32P1Q8NGA4 272 aa17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 SMAP2Q8WU79 429 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 SLCO5A1Q9H2Y9 848 aa17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 KAT8Q9H7Z6 458 aaKnown RBP17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 NANOGQ9H9S0 305 aa17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 SAR1AQ9NR31 198 aa17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 RASD1Q9Y272 281 aa17.6■□□□□ 0.41
TRAPPC6A-203ENST00000587818 SHISA9B4DS77 424 aa17.59■□□□□ 0.41
TRAPPC6A-203ENST00000587818 M0R1B8 84 aa17.59■□□□□ 0.41
TRAPPC6A-203ENST00000587818 GRPRP30550 384 aa17.59■□□□□ 0.41
TRAPPC6A-203ENST00000587818 GZMMP51124 257 aa17.59■□□□□ 0.41
TRAPPC6A-203ENST00000587818 NCALDP61601 193 aa17.59■□□□□ 0.41
TRAPPC6A-203ENST00000587818 LTBQ06643 244 aa17.59■□□□□ 0.41
TRAPPC6A-203ENST00000587818 RBBP4Q09028 425 aa17.59■□□□□ 0.41
TRAPPC6A-203ENST00000587818 ULK3Q6PHR2 472 aa17.59■□□□□ 0.41
TRAPPC6A-203ENST00000587818 RBM45Q8IUH3 476 aaKnown RBP17.59■□□□□ 0.41
TRAPPC6A-203ENST00000587818 PIAS4Q8N2W9 510 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC6A-203ENST00000587818 DNAJA4Q8WW22 397 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC6A-203ENST00000587818 FBXW5Q969U6 566 aa17.59■□□□□ 0.41
TRAPPC6A-203ENST00000587818 SLC47A1Q96FL8 570 aa17.59■□□□□ 0.41
TRAPPC6A-203ENST00000587818 MCHR1Q99705 422 aa17.59■□□□□ 0.41
TRAPPC6A-203ENST00000587818 C12orf10Q9HB07 376 aa17.59■□□□□ 0.41
TRAPPC6A-203ENST00000587818 CISD1Q9NZ45 108 aaKnown RBP17.59■□□□□ 0.41
TRAPPC6A-203ENST00000587818 USP22Q9UPT9 525 aa17.59■□□□□ 0.41
TRAPPC6A-203ENST00000587818 C2CD3Q4AC94 2353 aa17.58■□□□□ 0.41
TRAPPC6A-203ENST00000587818 ALPK2Q86TB3 2170 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 TRIM64A6NGJ6 449 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 TRIM64BA6NI03 449 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 M0R082 166 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 UPK3AO75631 287 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 KRT33AO76009 404 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 VAMP5O95183 116 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 LGI1O95970 557 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 DANCRP0C864 163 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 FOSL1P15407 271 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 GTF2E2P29084 291 aaKnown RBP17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 CDH12P55289 794 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 CLDN17P56750 224 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 RIPPLY3P57055 190 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 SLC25A3Q00325 362 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 SPOCK1Q08629 439 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 CYLC2Q14093 348 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 RABL3Q5HYI8 236 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 OR7E24Q6IFN5 339 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 LINGO2Q7L985 606 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 NET1Q7Z628 596 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 OR4D11Q8NGI4 311 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 VANGL1Q8TAA9 524 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 ZNF417Q8TAU3 575 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 SLC38A4Q969I6 547 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 C18orf12Q96KH6 178 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 ZNF587Q96SQ5 575 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 ARHGDIGQ99819 225 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 GSX2Q9BZM3 304 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 SLC17A5Q9NRA2 495 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 SELENONQ9NZV5 590 aa17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 TESQ9UGI8 421 aaKnown RBP17.58■□□□□ 0.4
TRAPPC6A-203ENST00000587818 TRAV36DV7A0A075B6V5 113 aa17.57■□□□□ 0.4
TRAPPC6A-203ENST00000587818 A0A087WUJ7 227 aa17.57■□□□□ 0.4
TRAPPC6A-203ENST00000587818 A0A0B4J2E0 115 aa17.57■□□□□ 0.4
TRAPPC6A-203ENST00000587818 A0A1B0GX12 115 aa17.57■□□□□ 0.4
TRAPPC6A-203ENST00000587818 LRRN3E7EW58 273 aa17.57■□□□□ 0.4
TRAPPC6A-203ENST00000587818 H7C1Q1 480 aa17.57■□□□□ 0.4
TRAPPC6A-203ENST00000587818 SMAD7O15105 426 aaKnown RBP17.57■□□□□ 0.4
TRAPPC6A-203ENST00000587818 MPGP29372 298 aa17.57■□□□□ 0.4
TRAPPC6A-203ENST00000587818 CDKN1AP38936 164 aa17.57■□□□□ 0.4
TRAPPC6A-203ENST00000587818 ATP5J2P56134 94 aa17.57■□□□□ 0.4
TRAPPC6A-203ENST00000587818 RPS4XP62701 263 aaKnown RBP17.57■□□□□ 0.4
TRAPPC6A-203ENST00000587818 IL1RL1Q01638 556 aa17.57■□□□□ 0.4
TRAPPC6A-203ENST00000587818 NPTX1Q15818 432 aa17.57■□□□□ 0.4
TRAPPC6A-203ENST00000587818 PGGHGQ32M88 737 aa17.57■□□□□ 0.4
TRAPPC6A-203ENST00000587818 MMEL1Q495T6 779 aa17.57■□□□□ 0.4
TRAPPC6A-203ENST00000587818 HIKESHIQ53FT3 197 aa17.57■□□□□ 0.4
TRAPPC6A-203ENST00000587818 SNX32Q86XE0 403 aa17.57■□□□□ 0.4
TRAPPC6A-203ENST00000587818 POMGNT2Q8NAT1 580 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms