RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 HIST3H2AQ7L7L0 130 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 SLC22A16Q86VW1 577 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 CISD2Q8N5K1 135 aaKnown RBP16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 BPIFB6Q8NFQ5 453 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 OR51A7Q8NH64 312 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 APH1BQ8WW43 257 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 IPCEF1Q8WWN9 437 aaPredicted RBP16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 HIST1H2ACQ93077 130 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 DDIT4LQ96D03 193 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 B4GALT7Q9UBV7 327 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 ATMQ13315 3056 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 TRAV27A0A087WT01 109 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 SNTNA6NMZ2 147 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 GDF1P27539 372 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 RPS4XP62701 263 aaKnown RBP16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 MFSD13AQ14CX5 517 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 TOMM20Q15388 145 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 SLC25A30Q5SVS4 291 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 C1orf140Q5VVS0 124 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 FAM26EQ8N5C1 309 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 TMEM251Q8N6I4 163 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 TMEM163Q8TC26 289 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 UBE2FQ969M7 185 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 UBQLN3Q9H347 655 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 MCCC2Q9HCC0 563 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 DKKL1Q9UK85 242 aa16.09■□□□□ 0.17
RBFOX1-222ENST00000585867 M0R3G1 203 aa16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 NPIPB7O75200 414 aa16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 CRYABP02511 175 aaKnown RBP16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 ZNF24P17028 368 aa16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 MAGEA5P43359 124 aa16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 FXYD6P3P58550 94 aa16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 OCLNQ16625 522 aa16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 FAM69AQ5T7M9 428 aa16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 C3orf33Q6P1S2 294 aa16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 ZNF773Q6PK81 442 aa16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 FAM180AQ6UWF9 173 aa16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 MAMDC2Q7Z304 686 aaPredicted RBP16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 CCDC103Q8IW40 242 aa16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 LNX2Q8N448 690 aa16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 TCEANCQ8N8B7 351 aa16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 OR4Q3Q8NH05 313 aa16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 SLC25A43Q8WUT9 341 aaPredicted RBP16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 KTI12Q96EK9 354 aaPredicted RBP16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 TNFRSF13CQ96RJ3 184 aa16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 IFT27Q9BW83 186 aa16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 ZNF703Q9H7S9 590 aaPredicted RBP16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 VCX3AQ9NNX9 186 aa16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 HIF3AQ9Y2N7 669 aa16.08■□□□□ 0.16
RBFOX1-222ENST00000585867 PCNX3Q9H6A9 2034 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 TTLL8A6PVC2 850 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 BHLHE40O14503 412 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 TFECO14948 347 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 SURF4O15260 269 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 TRAPPC6AO75865 159 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 ASAH2BP0C7U1 165 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 ATP6V1B1P15313 513 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 ZNF17P17021 662 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 DPP4P27487 766 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 RPS5P46782 204 aaKnown RBP16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 SELENBP1Q13228 472 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 GLYR1Q49A26 553 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 ARHGAP11AQ6P4F7 1023 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 DPY19L2P2Q6ZN68 376 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 NANOGNBQ7Z5D8 188 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 FAM109AQ8N4B1 249 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 ZNF540Q8NDQ6 660 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 TAAR8Q969N4 342 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 BBC3Q96PG8 261 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 IL4I1Q96RQ9 567 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 POTEKPQ9BYX7 375 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 DEFB127Q9H1M4 99 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 SLC6A5Q9Y345 797 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 SNX5Q9Y5X3 404 aa16.07■□□□□ 0.16
RBFOX1-222ENST00000585867 TRIM64CA6NLI5 447 aa16.06■□□□□ 0.16
RBFOX1-222ENST00000585867 TLX2O43763 284 aaPredicted RBP16.06■□□□□ 0.16
RBFOX1-222ENST00000585867 PRKYO43930 277 aa16.06■□□□□ 0.16
RBFOX1-222ENST00000585867 IFNGP01579 166 aa16.06■□□□□ 0.16
RBFOX1-222ENST00000585867 BGLAPP02818 100 aa16.06■□□□□ 0.16
RBFOX1-222ENST00000585867 HK1P19367 917 aa16.06■□□□□ 0.16
RBFOX1-222ENST00000585867 CLK1P49759 484 aaKnown RBP16.06■□□□□ 0.16
RBFOX1-222ENST00000585867 NR1H2P55055 460 aa16.06■□□□□ 0.16
RBFOX1-222ENST00000585867 FHL1Q13642 323 aa16.06■□□□□ 0.16
RBFOX1-222ENST00000585867 SLC10A1Q14973 349 aa16.06■□□□□ 0.16
RBFOX1-222ENST00000585867 MYDGFQ969H8 173 aa16.06■□□□□ 0.16
RBFOX1-222ENST00000585867 SNRNP40Q96DI7 357 aaKnown RBP16.06■□□□□ 0.16
RBFOX1-222ENST00000585867 GPX7Q96SL4 187 aaPredicted RBP16.06■□□□□ 0.16
RBFOX1-222ENST00000585867 ASPNQ9BXN1 380 aa16.06■□□□□ 0.16
RBFOX1-222ENST00000585867 FN3KQ9H479 309 aa16.06■□□□□ 0.16
RBFOX1-222ENST00000585867 DUSP21Q9H596 190 aa16.06■□□□□ 0.16
RBFOX1-222ENST00000585867 QPCTLQ9NXS2 382 aa16.06■□□□□ 0.16
RBFOX1-222ENST00000585867 M0R129 80 aa16.05■□□□□ 0.16
RBFOX1-222ENST00000585867 IDH3BO43837 385 aa16.05■□□□□ 0.16
RBFOX1-222ENST00000585867 XPNPEP2O43895 674 aa16.05■□□□□ 0.16
RBFOX1-222ENST00000585867 CELA3AP09093 270 aa16.05■□□□□ 0.16
RBFOX1-222ENST00000585867 GTF2E2P29084 291 aaKnown RBP16.05■□□□□ 0.16
RBFOX1-222ENST00000585867 SRD5A2P31213 254 aa16.05■□□□□ 0.16
RBFOX1-222ENST00000585867 RPL4P36578 427 aaKnown RBP16.05■□□□□ 0.16
RBFOX1-222ENST00000585867 RPL5P46777 297 aaKnown RBP16.05■□□□□ 0.16
RBFOX1-222ENST00000585867 SLC35A2P78381 396 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms