RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 CDC14CA4D256 554 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 SLC35F4A4IF30 521 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 ANKUB1A6NFN9 424 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 PRKNO60260 465 aaPredicted RBP10.25□□□□□ -0.77
LIG3-204ENST00000585740 GLCEO94923 617 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 TIAF1O95411 115 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 NUDT14O95848 222 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 CD1AP06126 327 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 GP1BAP07359 652 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 CELP19835 753 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 TGM1P22735 817 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 SDHAP31040 664 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 UQCRC1P31930 480 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 CD79BP40259 229 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 DIO1P49895 249 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 CTXN1P60606 82 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 FABP5Q01469 135 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 C17orf67Q0P5P2 114 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 ALG10Q5BKT4 473 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 FCRLBQ6BAA4 426 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 PAMR1Q6UXH9 720 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 MAMDC2Q7Z304 686 aaPredicted RBP10.25□□□□□ -0.77
LIG3-204ENST00000585740 GRINAQ7Z429 371 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 CCDC190Q86UF4 302 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 MARCH9Q86YJ5 346 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 SLC35F2Q8IXU6 374 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 SYS1Q8N2H4 156 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 LRRC17Q8N6Y2 441 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 ARIH2OSQ8N7S6 290 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 SLC38A9Q8NBW4 561 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 APCDD1LQ8NCL9 501 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 NPEPL1Q8NDH3 523 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 SLC22A8Q8TCC7 542 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 HAVCR2Q8TDQ0 301 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 GPR119Q8TDV5 335 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 ST8SIA1Q92185 356 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 TMEM203Q969S6 136 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 DDOQ99489 341 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 SLC30A2Q9BRI3 323 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 CRB3Q9BUF7 120 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 CCDC32Q9BV29 185 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 KATNB1Q9BVA0 655 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 NMNAT2Q9BZQ4 307 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 GALNT8Q9NY28 637 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 AKAP7Q9P0M2 348 aaPredicted RBP10.25□□□□□ -0.77
LIG3-204ENST00000585740 CMAHPQ9Y471 501 aa10.25□□□□□ -0.77
LIG3-204ENST00000585740 TMED7-TICAM2A0A0A6YYA0 188 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 TRBV11-1A0A0K0K1C0 115 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 ZC3H12DA2A288 527 aaKnown RBP10.24□□□□□ -0.77
LIG3-204ENST00000585740 A8MVM7 634 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 BLOC1S5-TXNDC5H3BN57 136 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 MEN1O00255 615 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 GABRPO00591 440 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 CASKO14936 926 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 PLPP2O43688 288 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 SCO2O43819 266 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 TRIM3O75382 744 aaPredicted RBP10.24□□□□□ -0.77
LIG3-204ENST00000585740 LDOC1O95751 146 aaPredicted RBP10.24□□□□□ -0.77
LIG3-204ENST00000585740 LALBAP00709 142 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 RENP00797 406 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 SERPINA3P01011 423 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 BGLAPP02818 100 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 KLK3P07288 261 aaPredicted RBP10.24□□□□□ -0.77
LIG3-204ENST00000585740 CD63P08962 238 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 SPI1P17947 270 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 MST1P26927 711 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 MSX1P28360 303 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 AQP2P41181 271 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 GBX2P52951 348 aaPredicted RBP10.24□□□□□ -0.77
LIG3-204ENST00000585740 DLX5P56178 289 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 ERVK-25P63136 954 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 MC2RQ01718 297 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 ZNF85Q03923 595 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 EGR4Q05215 589 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 ZFP36L1Q07352 338 aaKnown RBP10.24□□□□□ -0.77
LIG3-204ENST00000585740 ATP1A4Q13733 1029 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 OXA1LQ15070 435 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 QPRTQ15274 297 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 MRPL14Q6P1L8 145 aaKnown RBP10.24□□□□□ -0.77
LIG3-204ENST00000585740 MZT2AQ6P582 158 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 SHISA6Q6ZSJ9 500 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 VASH1Q7L8A9 365 aaPredicted RBP10.24□□□□□ -0.77
LIG3-204ENST00000585740 FAM122BQ7Z309 247 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 MS4A15Q8N5U1 240 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 PARP16Q8N5Y8 322 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 ZFP41Q8N8Y5 198 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 MOSPD2Q8NHP6 518 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 RNF138Q8WVD3 245 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 HGDQ93099 445 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 ABTB1Q969K4 478 aaPredicted RBP10.24□□□□□ -0.77
LIG3-204ENST00000585740 DEPDC7Q96QD5 511 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 SNX18Q96RF0 628 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 MNTQ99583 582 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 SPSB2Q99619 263 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 TM9SF2Q99805 663 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 KCNS3Q9BQ31 491 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 WDR77Q9BQA1 342 aaPredicted RBP10.24□□□□□ -0.77
LIG3-204ENST00000585740 GTPBP2Q9BX10 602 aaKnown RBP10.24□□□□□ -0.77
LIG3-204ENST00000585740 PARD6AQ9NPB6 346 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 SDHAF3Q9NRP4 125 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms