RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	MSI2	Q96DH6	328 aa	Known RBP	14.24	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	PAIP2	Q9BPZ3	127 aa	Known RBP	14.24	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	TAPBPL	Q9BX59	468 aa		14.24	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	CENPH	Q9H3R5	247 aa		14.24	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	CRNN	Q9UBG3	495 aa	Predicted RBP	14.24	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	14.24	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	ZNF232	Q9UNY5	417 aa		14.24	□□□□□ -0.13
PRKAR1A-206	ENST00000585460		V9GYY5	206 aa	Predicted RBP	14.24	□□□□□ -0.13
PRKAR1A-206	ENST00000585460		A0A096LPE4	126 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460		A0A1W2PPZ6	126 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	TMEM229A	B2RXF0	380 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	ZNF587B	E7ETH6	402 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	NDUFS8	O00217	210 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	HDAC3	O15379	428 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	SLC22A3	O75751	556 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	IL6	P05231	212 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	ZCCHC18	P0CG32	403 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	CRAT	P43155	626 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	WDR4	P57081	412 aa	Known RBP	14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	TUBA1B	P68363	451 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	TUBA4A	P68366	448 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	GGTLC2	Q14390	218 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	ADIPOQ	Q15848	244 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	KRTAP24-1	Q3LI83	254 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	NIPAL3	Q6P499	406 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	TUBA1A	Q71U36	451 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	MAGEE2	Q8TD90	523 aa	Predicted RBP	14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	C3orf49	Q96BT1	292 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	VRK1	Q99986	396 aa	Predicted RBP	14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	KATNB1	Q9BVA0	655 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	PARD6B	Q9BYG5	372 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	TPT1P8	Q9HAU6	139 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	CA10	Q9NS85	328 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	CALML5	Q9NZT1	146 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	P2RX2	Q9UBL9	471 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	RASD1	Q9Y272	281 aa		14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	ZNF443	Q9Y2A4	671 aa	Predicted RBP	14.23	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	ARPC4-TTLL3	A0A0A6YYG9	625 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	IGHV4-61	A0A0C4DH41	118 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460		A0A0G2JPF8	293 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	LOC100289279	A0A1B0GTE1	492 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	LOC390937	A0A1W2PQ73	354 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	OR6C65	A6NJZ3	312 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	HNRNPCL2	B2RXH8	293 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	HNRNPCL3	B7ZW38	293 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460		B9A039	149 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	FTCDNL1	E5RQL4	147 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	FRS3	O43559	492 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	HNRNPCL1	O60812	293 aa	Known RBP	14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	CRYAA	P02489	173 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	BCHE	P06276	602 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	OR4A8	P0C604	315 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	CECR9	P0C854	216 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	HNRNPCL4	P0DMR1	293 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	HOXB1	P14653	301 aa	Predicted RBP	14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	PAX7	P23759	505 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	IGFBP5	P24593	272 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	CALCR	P30988	508 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	CRISP3	P54108	245 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	DSTN	P60981	165 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	UBE2N	P61088	152 aa	Known RBP	14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	SNRPD2	P62316	118 aa	Known RBP	14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	HOXC5	Q00444	222 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	NAAA	Q02083	359 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	HGFAC	Q04756	655 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	LARS2	Q15031	903 aa	Known RBP	14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	ZSWIM7	Q19AV6	140 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	GTDC1	Q4AE62	458 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	PDCD4	Q53EL6	469 aa	Known RBP	14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	CEP85L	Q5SZL2	805 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	RNF220	Q5VTB9	566 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	SERPINA11	Q86U17	422 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	MFSD8	Q8NHS3	518 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	STK35	Q8TDR2	534 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	SPATA9	Q9BWV2	254 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	LINC00470	Q9BZP3	86 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	NELFA	Q9H3P2	528 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	PLK3	Q9H4B4	646 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	SEC61A2	Q9H9S3	476 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	THAP1	Q9NVV9	213 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	FKBP7	Q9Y680	259 aa		14.22	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	TRPC5OS	A6NMA1	111 aa		14.21	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	SNN	O75324	88 aa	Predicted RBP	14.21	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	ZNF432	O94892	652 aa		14.21	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	IGLV1-44	P01699	117 aa		14.21	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	KIT	P10721	976 aa		14.21	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	NCF2	P19878	526 aa	Predicted RBP	14.21	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	ARF1	P84077	181 aa	Known RBP	14.21	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	SRSF2	Q01130	221 aa	Known RBP	14.21	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	EGR4	Q05215	589 aa		14.21	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	EFNB3	Q15768	340 aa		14.21	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	CARTPT	Q16568	116 aa		14.21	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	C3orf36	Q3SXR2	165 aa		14.21	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	FAM120AOS	Q5T036	256 aa		14.21	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	HHAT	Q5VTY9	493 aa		14.21	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	PRAMEF8	Q5VWM4	474 aa		14.21	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	PRAMEF7	Q5VXH5	474 aa		14.21	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	NXN	Q6DKJ4	435 aa		14.21	□□□□□ -0.13
PRKAR1A-206	ENST00000585460	FAM166A	Q6J272	317 aa		14.21	□□□□□ -0.13

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms