RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 ANKRD19PQ9H560 264 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 RNF122Q9H9V4 155 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 NANSQ9NR45 359 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 ZNF629Q9UEG4 869 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-215ENST00000584944 Q9UFV3 132 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 CLEC4AQ9UMR7 237 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 A4GNTQ9UNA3 340 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 HTR3EA5X5Y0 456 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 FAM90A27PA6NNH2 459 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 SMAD9O15198 467 aaKnown RBP12.38□□□□□ -0.43
TRAF4-215ENST00000584944 KRT36O76013 467 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 VAMP5O95183 116 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 MT-ND1P03886 318 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 YES1P07947 543 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 IMPDH2P12268 514 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 PRF1P14222 555 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 AGAP20933 346 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 AHCYP23526 432 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 GRPRP30550 384 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 RRM2P31350 389 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 CEACAM8P31997 349 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-215ENST00000584944 AGFG1P52594 562 aaKnown RBP12.38□□□□□ -0.43
TRAF4-215ENST00000584944 SLC25A35Q3KQZ1 300 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 H1FNTQ75WM6 255 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-215ENST00000584944 ASRGL1Q7L266 308 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 FAM214BQ7L5A3 538 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 NANOGNBQ7Z5D8 188 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 NKAIN4Q8IVV8 208 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 ZNF100Q8IYN0 542 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 OR6S1Q8NH40 331 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 RNF128Q8TEB7 428 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 ACOT11Q8WXI4 607 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-215ENST00000584944 MARVELD3Q96A59 401 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 SGTBQ96EQ0 304 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 PIGMQ9H3S5 423 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 REEP1Q9H902 201 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 GP6Q9HCN6 339 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 CHST11Q9NPF2 352 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 PARPBPQ9NWS1 579 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 KLHL13Q9P2N7 655 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 PROCRQ9UNN8 238 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 RASD1Q9Y272 281 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 TMEM5Q9Y2B1 443 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 B3GALT5Q9Y2C3 310 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 PCNX3Q9H6A9 2034 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 PCNX1Q96RV3 2341 aa12.38□□□□□ -0.43
TRAF4-215ENST00000584944 MED12Q93074 2177 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 TEP1Q99973 2627 aaKnown RBP12.37□□□□□ -0.43
TRAF4-215ENST00000584944 IGKV1D-42A0A075B6H8 117 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 A0A1W2PNV4 684 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 A0A1W2PRQ8 180 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 TCRBV5S2A0A599 114 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 AQP7P3A6NL99 342 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 KDM4EB2RXH2 506 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-215ENST00000584944 M0R082 166 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 CYTIPO60759 359 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 NPIPB7O75200 414 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 E2F6O75461 281 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 KRT33AO76009 404 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 CLDN14O95500 239 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 IL18BPO95998 194 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 CST1P01037 141 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 IFI30P13284 250 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 ARHGDIAP52565 204 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 ADORA2A-AS1P86434 159 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 EGR4Q05215 589 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 DGCR6Q14129 220 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 GALNT5Q7Z7M9 940 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 CCDC103Q8IW40 242 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 RNF113BQ8IZP6 322 aaKnown RBP12.37□□□□□ -0.43
TRAF4-215ENST00000584944 TMEM99Q8N816 258 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 ZNF417Q8TAU3 575 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 BPIFA2Q96DR5 249 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 C7orf34Q96L11 122 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 ZNF587Q96SQ5 575 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-215ENST00000584944 CHID1Q9BWS9 393 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 C12orf49Q9H741 205 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 FKRPQ9H9S5 495 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 ZNF229Q9UJW7 825 aa12.37□□□□□ -0.43
TRAF4-215ENST00000584944 NOSIPQ9Y314 301 aaKnown RBP12.37□□□□□ -0.43
TRAF4-215ENST00000584944 ERICH4A6NGS2 130 aa12.36□□□□□ -0.43
TRAF4-215ENST00000584944 EFCAB9A8MZ26 197 aa12.36□□□□□ -0.43
TRAF4-215ENST00000584944 PRSS44E7EML9 344 aa12.36□□□□□ -0.43
TRAF4-215ENST00000584944 BLOC1S5-TXNDC5H3BN57 136 aa12.36□□□□□ -0.43
TRAF4-215ENST00000584944 TNFRSF11BO00300 401 aa12.36□□□□□ -0.43
TRAF4-215ENST00000584944 FFAR1O14842 300 aa12.36□□□□□ -0.43
TRAF4-215ENST00000584944 AKAP8O43823 692 aaKnown RBP12.36□□□□□ -0.43
TRAF4-215ENST00000584944 OR10H3O60404 316 aa12.36□□□□□ -0.43
TRAF4-215ENST00000584944 SS18L1O75177 396 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-215ENST00000584944 MRPL33O75394 65 aaKnown RBP12.36□□□□□ -0.43
TRAF4-215ENST00000584944 SERPINI2O75830 405 aa12.36□□□□□ -0.43
TRAF4-215ENST00000584944 TOXO94900 526 aa12.36□□□□□ -0.43
TRAF4-215ENST00000584944 ADORA3P0DMS8 318 aa12.36□□□□□ -0.43
TRAF4-215ENST00000584944 ZNF43P17038 809 aa12.36□□□□□ -0.43
TRAF4-215ENST00000584944 OR2T5Q6IEZ7 315 aa12.36□□□□□ -0.43
TRAF4-215ENST00000584944 LINC00114Q6XXX2 140 aa12.36□□□□□ -0.43
TRAF4-215ENST00000584944 WDR88Q6ZMY6 472 aa12.36□□□□□ -0.43
TRAF4-215ENST00000584944 SEM1Q6ZVN7 128 aa12.36□□□□□ -0.43
TRAF4-215ENST00000584944 MBOAT2Q6ZWT7 520 aa12.36□□□□□ -0.43
TRAF4-215ENST00000584944 PIWIL3Q7Z3Z3 882 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms