RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 ACVR1BP36896 505 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 CDKN1AP38936 164 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 SLC7A2P52569 658 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 SLC35A1P78382 337 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 RASGEF1BQ0VAM2 473 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 FAPQ12884 760 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 TSC22D1Q15714 1073 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ALG10BQ5I7T1 473 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ADAM5Q6NVV9 412 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 HIPK1Q86Z02 1210 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 LILRB1Q8NHL6 650 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 LZICQ8WZA0 190 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 NEUROG1Q92886 237 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 SLC47A1Q96FL8 570 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 HDHD5Q9BXW7 423 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 SRXN1Q9BYN0 137 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 OR11A1Q9GZK7 315 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ESRP2Q9H6T0 727 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 COQ10BQ9H8M1 238 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 NDE1Q9NXR1 346 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ADA2Q9NZK5 511 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 TMEM181Q9P2C4 612 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 BAG5Q9UL15 447 aa11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 MAGED1Q9Y5V3 778 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-234ENST00000584525 CCT8L1PA6NM43 557 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 A8MVM7 634 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 FXYD1O00168 92 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 DNPH1O43598 174 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 MFN2O95140 757 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 PMS2P2O95744 297 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 FAM107AO95990 144 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 GPIP06744 558 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 PNMTP11086 282 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 PRG2P13727 222 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 AGTR1P30556 359 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 MNAT1P51948 309 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 HOXC5Q00444 222 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 IL1RL1Q01638 556 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 LIPEQ05469 1076 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ADRM1Q16186 407 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 NCMAPQ5T1S8 102 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 HACD2Q6Y1H2 254 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 PIGWQ7Z7B1 504 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ADGRG3Q86Y34 549 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 TREML1Q86YW5 311 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 MED12LQ86YW9 2145 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 MICU2Q8IYU8 434 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 PIGXQ8TBF5 258 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 RNF128Q8TEB7 428 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 DNAJA4Q8WW22 397 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 KCTD14Q9BQ13 255 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 MYLK2Q9H1R3 596 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 SLCO5A1Q9H2Y9 848 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 SPAG4Q9NPE6 437 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 NGBQ9NPG2 151 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 TAGLN3Q9UI15 199 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 USF3Q68DE3 2245 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ROS1P08922 2347 aa11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 SONP18583 2426 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-234ENST00000584525 A8MV72 311 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 M0R3H8 397 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 EFNA2O43921 213 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 TPST1O60507 370 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ADAM11O75078 769 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 IGHV4-39P01824 125 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 C8BP07358 591 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 DANCRP0C864 163 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 CD247P20963 164 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ACAA2P42765 397 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 PCBP3P57721 371 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 PSME3P61289 254 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 PLAURQ03405 335 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 OR7A5Q15622 319 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 CHRFAM7AQ494W8 412 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ZNF672Q499Z4 452 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 GLIPR1L2Q4G1C9 344 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ULK3Q6PHR2 472 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 C5orf46Q6UWT4 87 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 C16orf89Q6UX73 402 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 C10orf53Q8N6V4 93 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ABHD3Q8WU67 409 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 HSD17B8Q92506 261 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 FAM162AQ96A26 154 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 C3orf49Q96BT1 292 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 TPD52L3Q96J77 140 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 HS6ST2Q96MM7 605 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 EPYCQ99645 322 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 MCHR1Q99705 422 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ALG2Q9H553 416 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 C12orf10Q9HB07 376 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 GP6Q9HCN6 339 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ADPRHL2Q9NX46 363 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 KLHL13Q9P2N7 655 aa11.6□□□□□ -0.55
CDK5RAP3-234ENST00000584525 RTTNQ86VV8 2226 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 GPR171O14626 319 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 ZNF682O95780 498 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 YES1P07947 543 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 BNIP2Q12982 314 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 CEACAM7Q14002 265 aa11.59□□□□□ -0.55
CDK5RAP3-234ENST00000584525 OR1Q1Q15612 314 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms