RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 SLC35A1P78382 337 aa14.67□□□□□ -0.06
CDK5RAP3-228ENST00000583363 FHL1Q13642 323 aa14.67□□□□□ -0.06
CDK5RAP3-228ENST00000583363 MFSD13AQ14CX5 517 aa14.67□□□□□ -0.06
CDK5RAP3-228ENST00000583363 OR7A5Q15622 319 aa14.67□□□□□ -0.06
CDK5RAP3-228ENST00000583363 RASSF6Q6ZTQ3 369 aa14.67□□□□□ -0.06
CDK5RAP3-228ENST00000583363 MAMDC2Q7Z304 686 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-228ENST00000583363 PARP8Q8N3A8 854 aa14.67□□□□□ -0.06
CDK5RAP3-228ENST00000583363 FAM26EQ8N5C1 309 aa14.67□□□□□ -0.06
CDK5RAP3-228ENST00000583363 OR2V1Q8NHB1 315 aa14.67□□□□□ -0.06
CDK5RAP3-228ENST00000583363 OSTF1Q92882 214 aa14.67□□□□□ -0.06
CDK5RAP3-228ENST00000583363 SNRNP40Q96DI7 357 aaKnown RBP14.67□□□□□ -0.06
CDK5RAP3-228ENST00000583363 WDYHV1Q96HA8 205 aa14.67□□□□□ -0.06
CDK5RAP3-228ENST00000583363 TNFRSF13CQ96RJ3 184 aa14.67□□□□□ -0.06
CDK5RAP3-228ENST00000583363 TAPBPLQ9BX59 468 aa14.67□□□□□ -0.06
CDK5RAP3-228ENST00000583363 VCXQ9H320 206 aa14.67□□□□□ -0.06
CDK5RAP3-228ENST00000583363 SPTAN1Q13813 2472 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 A0A1B0GTH9 108 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 EIF1AYO14602 144 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 HIST1H2ABP04908 130 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 TSPAN19P0C672 248 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 OSMP13725 252 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 CARD18P57730 90 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 RAC3P60763 192 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 IL1RL1Q01638 556 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 RFX4Q33E94 735 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 ANKDD1AQ495B1 522 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 ZBED5Q49AG3 693 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 PDSS1Q5T2R2 415 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 HIST3H2AQ7L7L0 130 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 GALNT5Q7Z7M9 940 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 OAFQ86UD1 273 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 KIF18BQ86Y91 864 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 UBQLNLQ8IYU4 475 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 MEIOBQ8N635 442 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 OR13C2Q8NGS9 318 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 OR51A7Q8NH64 312 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 HIST1H2ACQ93077 130 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 RDH12Q96NR8 316 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 ALKBH4Q9NXW9 302 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 MRPL39Q9NYK5 338 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 IL20Q9NYY1 176 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 SIGLEC7Q9Y286 467 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 ORC6Q9Y5N6 252 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 CORINQ9Y5Q5 1042 aa14.66□□□□□ -0.06
CDK5RAP3-228ENST00000583363 SEC14L5O43304 696 aa14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 SNAP29O95721 258 aa14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 IGFBP1P08833 259 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 AGFG1P52594 562 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 RAD23AP54725 363 aa14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 NUP107P57740 925 aa14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 CSNK2A1P68400 391 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 SRYQ05066 204 aa14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 ZNF239Q16600 458 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 ZIK1Q3SY52 487 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 HBMQ6B0K9 141 aa14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 ARHGAP11AQ6P4F7 1023 aa14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 H1FNTQ75WM6 255 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 GHDCQ8N2G8 530 aa14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 CLDN22Q8N7P3 220 aa14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 SCAIQ8N9R8 606 aa14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 OR5J2Q8NH18 312 aa14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 SARAFQ96BY9 339 aa14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 ASPNQ9BXN1 380 aa14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 MCCC2Q9HCC0 563 aa14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 SMPD3Q9NY59 655 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 TAS2R5Q9NYW4 299 aa14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 TNFRSF10DQ9UBN6 386 aa14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 HIF3AQ9Y2N7 669 aa14.65□□□□□ -0.06
CDK5RAP3-228ENST00000583363 ICE1Q9Y2F5 2266 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 TRAV27A0A087WT01 109 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 OR14I1A6ND48 311 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 E9PQ18 207 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 MS4A18H0YCH9 400 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 M0R082 166 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 PLPP3O14495 311 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 DNPH1O43598 174 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 CXCL13O43927 109 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 AKR7A3O95154 331 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 RCBTB2O95199 551 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 POLR2IP36954 125 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 EIF1AXP47813 144 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 TDGF1P3P51864 188 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 CRISP1P54107 249 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 AQP4P55087 323 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 FXYD6P3P58550 94 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 RPS3AP61247 264 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 ESRRGP62508 458 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 RPS4XP62701 263 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 H3F3AP84243 136 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 HSF1Q00613 529 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 ZP4Q12836 540 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 NPRL3Q12980 569 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 PMS2P3Q13401 168 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 SGCBQ16585 318 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 MS4A18Q3C1V0 323 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 SMARCD3Q6STE5 483 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 ZNF620Q6ZNG0 422 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 FGD2Q7Z6J4 655 aa14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 CHERPQ8IWX8 916 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-228ENST00000583363 OR10D3Q8NH80 312 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms