RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 TMEM120AQ9BXJ8 343 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 SAP130Q9H0E3 1048 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 NSRP1Q9H0G5 558 aaKnown RBP10.68□□□□□ -0.7
TOP3A-215ENST00000583328 SDR39U1Q9NRG7 319 aaPredicted RBP10.68□□□□□ -0.7
TOP3A-215ENST00000583328 TMEM45AQ9NWC5 275 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 ZIM2Q9NZV7 527 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 KLHL14Q9P2G3 628 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 KCNE5Q9UJ90 142 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 PCDHB10Q9UN67 800 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 TRAPPC4Q9Y296 219 aa10.68□□□□□ -0.7
TOP3A-215ENST00000583328 CENPVL1A0A0U1RR11 272 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 SH3PXD2BA1X283 911 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 CFLARO15519 480 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 FCMRO60667 390 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 STX11O75558 287 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 UGT2B17O75795 530 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 KRT33AO76009 404 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 AK1P00568 194 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 PAX7P23759 505 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 MRPL19P49406 292 aaKnown RBP10.67□□□□□ -0.7
TOP3A-215ENST00000583328 ARFIP2P53365 341 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 STX1BP61266 288 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 H3F3AP84243 136 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 NAAAQ02083 359 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 SLC17A1Q14916 467 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 SHQ1Q6PI26 577 aaKnown RBP10.67□□□□□ -0.7
TOP3A-215ENST00000583328 OLIG3Q7RTU3 272 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 AAED1Q7RTV5 226 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 ABHD12BQ7Z5M8 362 aaPredicted RBP10.67□□□□□ -0.7
TOP3A-215ENST00000583328 PEG10Q86TG7 708 aaKnown RBP10.67□□□□□ -0.7
TOP3A-215ENST00000583328 ADGRG3Q86Y34 549 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 ZCCHC24Q8N2G6 241 aaKnown RBP10.67□□□□□ -0.7
TOP3A-215ENST00000583328 MIER2Q8N344 545 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 POMGNT2Q8NAT1 580 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 GLB1L3Q8NCI6 653 aaPredicted RBP10.67□□□□□ -0.7
TOP3A-215ENST00000583328 OR4F15Q8NGB8 312 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 OR5AK3PQ8NH89 298 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 PSMA8Q8TAA3 256 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 SFXN5Q8TD22 340 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 MOAP1Q96BY2 351 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 COQ8BQ96D53 544 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 AURKBQ96GD4 344 aaPredicted RBP10.67□□□□□ -0.7
TOP3A-215ENST00000583328 ZBTB18Q99592 522 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 DOK1Q99704 481 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 DUSP26Q9BV47 211 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 RBM4Q9BWF3 364 aaKnown RBP10.67□□□□□ -0.7
TOP3A-215ENST00000583328 DYNLRB1Q9NP97 96 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 HIF1ANQ9NWT6 349 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 MKLN1Q9UL63 735 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 TRIM33Q9UPN9 1127 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 GRIP1Q9Y3R0 1128 aa10.67□□□□□ -0.7
TOP3A-215ENST00000583328 GMNCA6NCL1 334 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 DUXAA6NLW8 204 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 LYNX1G3V0Z9 82 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 LYNX1P0DP58 116 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 NPR2P20594 1047 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 MATN1P21941 496 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 SOAT1P35610 550 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 PGM1P36871 562 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 ATP4BP51164 291 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 SEC24CP53992 1094 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 NME5P56597 212 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 UFM1P61960 85 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 RPS26P62854 115 aaKnown RBP10.66□□□□□ -0.7
TOP3A-215ENST00000583328 RIN1Q13671 783 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 ADRM1Q16186 407 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 TBRG1Q3YBR2 411 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 METTL21CQ5VZV1 264 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 THSD4Q6ZMP0 1018 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 SPATA21Q7Z572 469 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 SVOPLQ8N434 492 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 OR8J2Q8NGG1 315 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 TMEM45BQ96B21 275 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 TMEM186Q96B77 213 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 DDIT4LQ96D03 193 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 LPAR2Q9HBW0 351 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 SLC35A3Q9Y2D2 325 aa10.66□□□□□ -0.7
TOP3A-215ENST00000583328 BCAS1O75363 584 aaPredicted RBP10.65□□□□□ -0.7
TOP3A-215ENST00000583328 SLC22A3O75751 556 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 LGI1O95970 557 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 CECR9P0C854 216 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 IMPDH2P12268 514 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 CALCRP30988 508 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 S100A3P33764 101 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 THBS4P35443 961 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 IDH2P48735 452 aaKnown RBP10.65□□□□□ -0.7
TOP3A-215ENST00000583328 TUBA1BP68363 451 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 TUBA4AP68366 448 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 IL1RL1Q01638 556 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 MAPK14Q16539 360 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 PGS1Q32NB8 556 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 ARHGAP11BQ3KRB8 267 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 PDLIM3Q53GG5 364 aaPredicted RBP10.65□□□□□ -0.7
TOP3A-215ENST00000583328 SPANXN4Q5MJ08 99 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 ANXA8L1Q5VT79 327 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 OR4F3Q6IEY1 312 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 TUBA1AQ71U36 451 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 C16orf62Q7Z3J2 963 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 C6orf120Q7Z4R8 191 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 CPLX4Q7Z7G2 160 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms