RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 FOXC2Q99958 501 aa9.06□□□□□ -0.96
PPP4R1-220ENST00000581835 ELAC2Q9BQ52 826 aaKnown RBP9.06□□□□□ -0.96
PPP4R1-220ENST00000581835 CXXC4Q9H2H0 198 aa9.06□□□□□ -0.96
PPP4R1-220ENST00000581835 PARPBPQ9NWS1 579 aa9.06□□□□□ -0.96
PPP4R1-220ENST00000581835 MALT1Q9UDY8 824 aa9.06□□□□□ -0.96
PPP4R1-220ENST00000581835 USP22Q9UPT9 525 aa9.06□□□□□ -0.96
PPP4R1-220ENST00000581835 TRAV36DV7A0A075B6V5 113 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 PDLIM1O00151 329 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 CCDC22O60826 627 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 COX4I1P13073 169 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 CD53P19397 219 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 CDH12P55289 794 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 FOXG1P55316 489 aaPredicted RBP9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 FAPQ12884 760 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 NPTX1Q15818 432 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 ENTPD8Q5MY95 495 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 TIMM23BQ5SRD1 257 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 SWT1Q5T5J6 900 aaKnown RBP9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 FAM69AQ5T7M9 428 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 TSPO2Q5TGU0 170 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 ALKBH2Q6NS38 261 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 ERICH5Q6P6B1 374 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 SEZ6L2Q6UXD5 910 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 CASP12Q6UXS9 341 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 CREB3L2Q70SY1 520 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 SPATA21Q7Z572 469 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 TREML1Q86YW5 311 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 RBM45Q8IUH3 476 aaKnown RBP9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 EPHX4Q8IUS5 362 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 P3H2Q8IVL5 708 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 RNF217Q8TC41 542 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 SLC26A7Q8TE54 656 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 RASSF5Q8WWW0 418 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 TMEM204Q9BSN7 226 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 SLC7A10Q9NS82 523 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 ASB6Q9NWX5 421 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 SELENONQ9NZV5 590 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 SEC14L4Q9UDX3 406 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 RASD1Q9Y272 281 aa9.05□□□□□ -0.96
PPP4R1-220ENST00000581835 ZFHX3Q15911 3703 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 CIB4A0PJX0 185 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 OR5H1A6NKK0 313 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 CPSF4LA6NMK7 179 aaKnown RBP9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 FAM220BPB1ANY3 271 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 SNX3O60493 162 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 RAD51DO75771 328 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 PLAUP00749 431 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 THY1P04216 161 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 ITGA5P08648 1049 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 GGT1P19440 569 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 DRD4P21917 467 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 GTF2E2P29084 291 aaKnown RBP9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 LSP1P33241 339 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 GYS2P54840 703 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 LTBQ06643 244 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 STK11Q15831 433 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 ACKR1Q16570 336 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 DEFB113Q30KQ7 82 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 NCMAPQ5T1S8 102 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 ZNF613Q6PF04 617 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 LINC00114Q6XXX2 140 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 AAED1Q7RTV5 226 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 TSPYL5Q86VY4 417 aaPredicted RBP9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 P2RY8Q86VZ1 359 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 SLC15A3Q8IY34 581 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 KDM8Q8N371 416 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 VANGL1Q8TAA9 524 aaPredicted RBP9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 ADAMTS16Q8TE57 1224 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 MUS81Q96NY9 551 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 ALPK1Q96QP1 1244 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 FAM107BQ9H098 131 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 PCDHAC1Q9H158 963 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 MYLK2Q9H1R3 596 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 UBTD1Q9HAC8 227 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 NGBQ9NPG2 151 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 CMTM6Q9NX76 183 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 TAS2R16Q9NYV7 291 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 UPB1Q9UBR1 384 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 B3GALT5Q9Y2C3 310 aa9.04□□□□□ -0.96
PPP4R1-220ENST00000581835 SETD2Q9BYW2 2564 aaPredicted RBP9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 GMNCA6NCL1 334 aa9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 CCT8L1PA6NM43 557 aa9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 M0R082 166 aa9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 AIM2O14862 343 aa9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 CHP2O43745 196 aa9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 LYPD3O95274 346 aa9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 PTNP21246 168 aa9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 CBLP22681 906 aa9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 GRPRP30550 384 aa9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 SELENOPP49908 381 aa9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 MFSD13AQ14CX5 517 aa9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 PPA1Q15181 289 aa9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 GABRA6Q16445 453 aa9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 C9orf135Q5VTT2 229 aa9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 C8orf82Q6P1X6 216 aaPredicted RBP9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 WDR88Q6ZMY6 472 aa9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 ZNF704Q6ZNC4 412 aaPredicted RBP9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 H1FNTQ75WM6 255 aaPredicted RBP9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 SSX8Q7RTT4 187 aa9.03□□□□□ -0.96
PPP4R1-220ENST00000581835 POMGNT2Q8NAT1 580 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms