RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 FBLIM1Q8WUP2 373 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 ABTB1Q969K4 478 aaPredicted RBP12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 GTPBP3Q969Y2 492 aaKnown RBP12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 SLC41A3Q96GZ6 507 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 MPP4Q96JB8 637 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 TUBA1CQ9BQE3 449 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 SLC6A5Q9Y345 797 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 OR2M5A3KFT3 312 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 SH3D21A4FU49 640 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 TRIM64CA6NLI5 447 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 FIGNL2A6NMB9 653 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 H3BN98 237 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 M0R3G1 203 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 ETV2O00321 342 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 SLC1A7O00341 560 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 FFAR1O14842 300 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 BCAS1O75363 584 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 TPOP07202 933 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 PEPDP12955 493 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 PRKCAP17252 672 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 TCEA1P23193 301 aaKnown RBP12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 CRHBPP24387 322 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 HTR3AP46098 478 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 IDH2P48735 452 aaKnown RBP12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 GFRA1P56159 465 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 B3GALT5-AS1P59052 145 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 PLAURQ03405 335 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 CRYZQ08257 329 aaKnown RBP12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 BCL2A1Q16548 175 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 TMEM44Q2T9K0 475 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 SLC25A53Q5H9E4 307 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 VASNQ6EMK4 673 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 ZNF770Q6IQ21 691 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 C1orf94Q6P1W5 598 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 PGBD2Q6P3X8 592 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 PODNL1Q6PEZ8 512 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 Q6ZPB1 254 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 LACC1Q8IV20 430 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 CLIP4Q8N3C7 705 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 OR4D11Q8NGI4 311 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 SLC7A13Q8TCU3 470 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 ADAMTS16Q8TE57 1224 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 TRUB1Q8WWH5 349 aaKnown RBP12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 RLIMQ9NVW2 624 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 CLN6Q9NWW5 311 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 SPRR3Q9UBC9 169 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 ZNF835Q9Y2P0 537 aa12.15□□□□□ -0.46
CSNK1D-220ENST00000581737 MED12Q93074 2177 aa12.15□□□□□ -0.47
CSNK1D-220ENST00000581737 IRGMA1A4Y4 181 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 CCDC160A6NGH7 325 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 GJE1A6NN92 205 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 NPIPA2E9PIF3 369 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 NPIPA3F8WFD2 350 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 WISP2O76076 250 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 HOXD4P09016 255 aaPredicted RBP12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 GABRA1P14867 456 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 BMP7P18075 431 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 PTGER4P35408 488 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 RBM34P42696 430 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 SMSP52788 366 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 DLX5P56178 289 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 FOXF1Q12946 379 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 TSPAN31Q12999 210 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 SELENBP1Q13228 472 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 CDK5R2Q13319 367 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 NPTX1Q15818 432 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 KLHL17Q6TDP4 642 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 MBOAT2Q6ZWT7 520 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 GRINAQ7Z429 371 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 RBM45Q8IUH3 476 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 SLC43A2Q8N370 569 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 MEIOBQ8N635 442 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 MYDGFQ969H8 173 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 LURAP1Q96LR2 239 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 SLC38A2Q96QD8 506 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 NIPSNAP1Q9BPW8 284 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 NDEL1Q9GZM8 345 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 TP63Q9H3D4 680 aaPredicted RBP12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 SERINC1Q9NRX5 453 aa12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 SPIN1Q9Y657 262 aaPredicted RBP12.14□□□□□ -0.47
CSNK1D-220ENST00000581737 ZAR1LA6NP61 321 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 H3BML4 177 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 WDR1O75083 606 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 NTN1O95631 604 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 EPPINO95925 133 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 GASTP01350 101 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 TFAP2AP05549 437 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 STSP08842 583 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 CPN1P15169 458 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 FPR3P25089 353 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 FKBP2P26885 142 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 POU1F1P28069 291 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 APOBEC1P41238 236 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 SLC1A3P43003 542 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 TOMM34Q15785 309 aaPredicted RBP12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 MEDAGQ5VYS4 303 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 WBP2NLQ6ICG8 309 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 FGD2Q7Z6J4 655 aa12.13□□□□□ -0.47
CSNK1D-220ENST00000581737 CD163Q86VB7 1156 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms