RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 RPS6KA3P51812 740 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 CLDN20P56880 219 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 CARD18P57730 90 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 PMS2P3Q13401 168 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 ZNF239Q16600 458 aaKnown RBP9.64□□□□□ -0.87
SS18-213ENST00000579640 ST3GAL2Q16842 350 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 HBMQ6B0K9 141 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 ARHGAP11AQ6P4F7 1023 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 PAQR6Q6TCH4 344 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 H1FNTQ75WM6 255 aaPredicted RBP9.64□□□□□ -0.87
SS18-213ENST00000579640 KIF18BQ86Y91 864 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 LRRC17Q8N6Y2 441 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 OR51A7Q8NH64 312 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 ZNF417Q8TAU3 575 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 GPR137Q96N19 417 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 TNFRSF13CQ96RJ3 184 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 ZNF587Q96SQ5 575 aaPredicted RBP9.64□□□□□ -0.87
SS18-213ENST00000579640 MBOAT4Q96T53 435 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 NAA11Q9BSU3 229 aaPredicted RBP9.64□□□□□ -0.87
SS18-213ENST00000579640 TEX12Q9BXU0 123 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 GRIP2Q9C0E4 1043 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 Q9H521 79 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 MCCC2Q9HCC0 563 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 CHST11Q9NPF2 352 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 TBC1D23Q9NUY8 699 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 FAM118AQ9NWS6 357 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 LUZP4Q9P127 313 aa9.64□□□□□ -0.87
SS18-213ENST00000579640 LAMA5O15230 3695 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 SOX14O95416 240 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 POU1F1P28069 291 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 UQCRC1P31930 480 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 CAPGP40121 348 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 AGFG1P52594 562 aaKnown RBP9.63□□□□□ -0.87
SS18-213ENST00000579640 ZP4Q12836 540 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 FHL1Q13642 323 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 KEAP1Q14145 624 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 ZNF324BQ6AW86 544 aaPredicted RBP9.63□□□□□ -0.87
SS18-213ENST00000579640 PM20D2Q8IYS1 436 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 UBQLNLQ8IYU4 475 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 GHDCQ8N2G8 530 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 OR10D3Q8NH80 312 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 FAR1Q8WVX9 515 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 TFAP2CQ92754 450 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 CPNE4Q96A23 557 aaPredicted RBP9.63□□□□□ -0.87
SS18-213ENST00000579640 HRASLS5Q96KN8 279 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 GPX7Q96SL4 187 aaPredicted RBP9.63□□□□□ -0.87
SS18-213ENST00000579640 TIMP4Q99727 224 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 PRRG3Q9BZD7 231 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 TSPAN10Q9H1Z9 355 aaPredicted RBP9.63□□□□□ -0.87
SS18-213ENST00000579640 EGLN3Q9H6Z9 239 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 SLC25A19Q9HC21 320 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 FANCFQ9NPI8 374 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 SPRR3Q9UBC9 169 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 BAIAP2Q9UQB8 552 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 MGAQ8IWI9 3026 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 LOC400499M0QZD8 3231 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 PKD1L2Q7Z442 2459 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 CFAP47Q6ZTR5 3102 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 LOC100130705A0A1B0GUX0 176 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 AQP7P3A6NL99 342 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 ZAR1LA6NP61 321 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 E9PQ18 207 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 BLOC1S5-TXNDC5H3BN57 136 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 PLPP3O14495 311 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 VAMP5O95183 116 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 ADORA3P0DMS8 318 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 AQP2P41181 271 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 EIF1AXP47813 144 aaKnown RBP9.63□□□□□ -0.87
SS18-213ENST00000579640 GIPRP48546 466 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 SMSP52788 366 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 SUCLG1P53597 346 aaKnown RBP9.63□□□□□ -0.87
SS18-213ENST00000579640 CLDN15P56746 228 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 FXYD6P3P58550 94 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 ADARB1P78563 741 aaKnown RBP9.63□□□□□ -0.87
SS18-213ENST00000579640 RPL18Q07020 188 aaKnown RBP9.63□□□□□ -0.87
SS18-213ENST00000579640 C19orf57Q0VDD7 668 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 IL18R1Q13478 541 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 PTGES3Q15185 160 aaKnown RBP9.63□□□□□ -0.87
SS18-213ENST00000579640 ALG10Q5BKT4 473 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 SLC27A4Q6P1M0 643 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 DPY19L2P2Q6ZN68 376 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 CHMP1BQ7LBR1 199 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 LSRQ86X29 649 aaPredicted RBP9.63□□□□□ -0.87
SS18-213ENST00000579640 OR2T33Q8NG76 320 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 CYGBQ8WWM9 190 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 DNAJA3Q96EY1 480 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 WDYHV1Q96HA8 205 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 SAMD8Q96LT4 415 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 ZNF570Q96NI8 536 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 PITX2Q99697 317 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 TSSK6Q9BXA6 273 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 PLA2G12AQ9BZM1 189 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 PRDM14Q9GZV8 571 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 NDRG4Q9ULP0 352 aaKnown RBP9.63□□□□□ -0.87
SS18-213ENST00000579640 RASD1Q9Y272 281 aa9.63□□□□□ -0.87
SS18-213ENST00000579640 LOC102725191A0A1B0GVB3 256 aa9.62□□□□□ -0.87
SS18-213ENST00000579640 A0A1W2PNV4 684 aa9.62□□□□□ -0.87
SS18-213ENST00000579640 BCKDKO14874 412 aa9.62□□□□□ -0.87
SS18-213ENST00000579640 CXCL13O43927 109 aa9.62□□□□□ -0.87
SS18-213ENST00000579640 AKR7A3O95154 331 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 292.7 ms