RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 HS6ST2Q96MM7 605 aa11.3□□□□□ -0.6
CDK5RAP3-203ENST00000577442 ZNF300Q96RE9 604 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-203ENST00000577442 ZNF426Q9BUY5 554 aa11.3□□□□□ -0.6
CDK5RAP3-203ENST00000577442 ASPNQ9BXN1 380 aa11.3□□□□□ -0.6
CDK5RAP3-203ENST00000577442 KLHL4Q9C0H6 718 aa11.3□□□□□ -0.6
CDK5RAP3-203ENST00000577442 PARPBPQ9NWS1 579 aa11.3□□□□□ -0.6
CDK5RAP3-203ENST00000577442 KCNN3Q9UGI6 736 aa11.3□□□□□ -0.6
CDK5RAP3-203ENST00000577442 RIMS3Q9UJD0 308 aa11.3□□□□□ -0.6
CDK5RAP3-203ENST00000577442 ING1Q9UK53 422 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-203ENST00000577442 B3GALT5Q9Y2C3 310 aa11.3□□□□□ -0.6
CDK5RAP3-203ENST00000577442 NOSIPQ9Y314 301 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-203ENST00000577442 ROS1P08922 2347 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 ZNF814B7Z6K7 855 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 M0R082 166 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 CNOT4O95628 575 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 GRPRP30550 384 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 KIR2DL3P43628 341 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 PIN1Q13526 163 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 SLC17A1Q14916 467 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 POU4F3Q15319 338 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 EXOC3L2Q2M3D2 409 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 ZNF787Q6DD87 383 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 HIST2H2BCQ6DN03 193 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 TMEM225Q6GV28 225 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 ZNF474Q6S9Z5 364 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 H1FNTQ75WM6 255 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 NUFIP2Q7Z417 695 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 GPAT4Q86UL3 456 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 TSPYL5Q86VY4 417 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 P3H2Q8IVL5 708 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 ZNF610Q8N9Z0 462 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 OR9K2Q8NGE7 335 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 ZNF417Q8TAU3 575 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 FAM222BQ8WU58 562 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 MCUR1Q96AQ8 359 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 TMEM45BQ96B21 275 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 APH1AQ96BI3 265 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 ZNF587Q96SQ5 575 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 FNDC11Q9BVV2 318 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 TAS2R1Q9NYW7 299 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 ACTR3BQ9P1U1 418 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 FAM32AQ9Y421 112 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 FLVCR1Q9Y5Y0 555 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 ENPP4Q9Y6X5 453 aa11.29□□□□□ -0.6
CDK5RAP3-203ENST00000577442 HTR3EA5X5Y0 456 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 TUBAL3A6NHL2 446 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 C16orf97H3BN30 126 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 GYG2O15488 501 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 AKAP8O43823 692 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 RAMP1O60894 148 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 MRPL33O75394 65 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 IGF2P01344 180 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 BGLAPP02818 100 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 THY1P04216 161 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 NQO1P15559 274 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 ITGA2P17301 1181 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 RASSF2P50749 326 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 P2RY4P51582 365 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 CASP12Q6UXS9 341 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 WDR88Q6ZMY6 472 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 TMEM239Q8WW34 195 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 PYURFQ96I23 114 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 PRSS27Q9BQR3 290 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 TRIM15Q9C019 465 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 AMBRA1Q9C0C7 1298 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 ANKRD19PQ9H560 264 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 FKRPQ9H9S5 495 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 MRPL39Q9NYK5 338 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 NDRG3Q9UGV2 375 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 A4GNTQ9UNA3 340 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 MED31Q9Y3C7 131 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 POLQO75417 2590 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 PRR14LQ5THK1 2151 aa11.28□□□□□ -0.6
CDK5RAP3-203ENST00000577442 ANKRD17O75179 2603 aaKnown RBP11.27□□□□□ -0.6
CDK5RAP3-203ENST00000577442 CCDC168Q8NDH2 2452 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 OR6C65A6NJZ3 312 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 KPNA4O00629 521 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 ATP5HO75947 161 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 PDE5AO76074 875 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 MT-ND1P03886 318 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 PPP3CBP16298 524 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 ZNF43P17038 809 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 RHCEP18577 417 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 PSMB1P20618 241 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 PTNP21246 168 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 SSTR2P30874 369 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 MSX2P35548 267 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 IL1RL1Q01638 556 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 PUDPQ08623 228 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 PMS2P3Q13401 168 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 C1DQ13901 141 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 TRIM25Q14258 630 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 TRAM2Q15035 370 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 P2RY6Q15077 328 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 ZNF74Q16587 644 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 LCN8Q6JVE9 175 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 Q6ZT83 130 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 DHFR2Q86XF0 187 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 NKAIN4Q8IVV8 208 aa11.27□□□□□ -0.61
CDK5RAP3-203ENST00000577442 OR5J2Q8NH18 312 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms