RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 FAM27E3Q08E93 113 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 SNTB1Q13884 538 aaKnown RBP13.51□□□□□ -0.25
LITAF-217ENST00000575426 SLC17A1Q14916 467 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 DNAL1Q4LDG9 190 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 H1FNTQ75WM6 255 aaPredicted RBP13.51□□□□□ -0.25
LITAF-217ENST00000575426 HIST3H2AQ7L7L0 130 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 LSRQ86X29 649 aaPredicted RBP13.51□□□□□ -0.25
LITAF-217ENST00000575426 HIST1H2ACQ93077 130 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 PRRC1Q96M27 445 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 SLC19A3Q9BZV2 496 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 KLHL4Q9C0H6 718 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 ING1Q9UK53 422 aaPredicted RBP13.51□□□□□ -0.25
LITAF-217ENST00000575426 B3GALT5Q9Y2C3 310 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 CORINQ9Y5Q5 1042 aa13.51□□□□□ -0.25
LITAF-217ENST00000575426 FTCDNL1E5RQL4 147 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 C16orf97H3BN30 126 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 M0R082 166 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 OR6A2O95222 327 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 LYPD3O95274 346 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 MT-ATP6P00846 226 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 THY1P04216 161 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 GRPRP30550 384 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 RBM34P42696 430 aaKnown RBP13.5□□□□□ -0.25
LITAF-217ENST00000575426 OR3A2P47893 321 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 PMS2P3Q13401 168 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 FXNQ16595 210 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 TFAP2EQ6VUC0 442 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 TSPYL5Q86VY4 417 aaPredicted RBP13.5□□□□□ -0.25
LITAF-217ENST00000575426 UBE2J2Q8N2K1 259 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 ACBD4Q8NC06 268 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 OR9K2Q8NGE7 335 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 ZNF417Q8TAU3 575 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 TMEM239Q8WW34 195 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 MCUR1Q96AQ8 359 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 APH1AQ96BI3 265 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 PYURFQ96I23 114 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 OXGR1Q96P68 337 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 ZNF587Q96SQ5 575 aaPredicted RBP13.5□□□□□ -0.25
LITAF-217ENST00000575426 THTPAQ9BU02 230 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 MUC13Q9H3R2 512 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 KCNN3Q9UGI6 736 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 FLVCR1Q9Y5Y0 555 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 V9GYQ6 96 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 CRYBG3Q68DQ2 2970 aa13.5□□□□□ -0.25
LITAF-217ENST00000575426 KPNA4O00629 521 aaPredicted RBP13.49□□□□□ -0.25
LITAF-217ENST00000575426 CASKO14936 926 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 CH25HO95992 272 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 BGLAPP02818 100 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 UMPSP11172 480 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 ZNF43P17038 809 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 ITGA2P17301 1181 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 RASSF2P50749 326 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 C1DQ13901 141 aaKnown RBP13.49□□□□□ -0.25
LITAF-217ENST00000575426 TRIM25Q14258 630 aaKnown RBP13.49□□□□□ -0.25
LITAF-217ENST00000575426 TRAM2Q15035 370 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 MTX3Q5HYI7 312 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 CASP12Q6UXS9 341 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 WDR88Q6ZMY6 472 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 RRM2BQ7LG56 351 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 AAED1Q7RTV5 226 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 DHFR2Q86XF0 187 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 NKAIN4Q8IVV8 208 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 SCAIQ8N9R8 606 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 LINC01560Q8TB33 94 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 FAM222BQ8WU58 562 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 PRSS27Q9BQR3 290 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 HDHD5Q9BXW7 423 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 NANSQ9NR45 359 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 ACTR3BQ9P1U1 418 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 UPB1Q9UBR1 384 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 A4GNTQ9UNA3 340 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 MED31Q9Y3C7 131 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 ENPP4Q9Y6X5 453 aa13.49□□□□□ -0.25
LITAF-217ENST00000575426 J3KTA2 159 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 ATP5HO75947 161 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 PDE5AO76074 875 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 ADAP00813 363 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 MT-ND1P03886 318 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 SSTR2P30874 369 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 UGT2B10P36537 528 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 P2RY4P51582 365 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 LTBQ06643 244 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 POU4F3Q15319 338 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 CYP2R1Q6VVX0 501 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 CREB3L2Q70SY1 520 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.48□□□□□ -0.25
LITAF-217ENST00000575426 OFCC1Q8IZS5 231 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 KDM8Q8N371 416 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 ADPRHL1Q8NDY3 354 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 OR5J2Q8NH18 312 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 TMEM255BQ8WV15 326 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 POP5Q969H6 163 aaKnown RBP13.48□□□□□ -0.25
LITAF-217ENST00000575426 TMEM45BQ96B21 275 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 LRGUKQ96M69 825 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 MOGAT1Q96PD6 335 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 BTBD10Q9BSF8 475 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 ZNF426Q9BUY5 554 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 FKRPQ9H9S5 495 aa13.48□□□□□ -0.25
LITAF-217ENST00000575426 MRPL39Q9NYK5 338 aaKnown RBP13.48□□□□□ -0.25
LITAF-217ENST00000575426 RHCGQ9UBD6 479 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms