RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 FBXW9Q5XUX1 488 aa18.31■□□□□ 0.52
HCFC1R1-208ENST00000575214 BHLHA15Q7RTS1 189 aaPredicted RBP18.31■□□□□ 0.52
HCFC1R1-208ENST00000575214 TPD52L3Q96J77 140 aa18.31■□□□□ 0.52
HCFC1R1-208ENST00000575214 CCT8L2Q96SF2 557 aa18.31■□□□□ 0.52
HCFC1R1-208ENST00000575214 POLQO75417 2590 aa18.31■□□□□ 0.52
HCFC1R1-208ENST00000575214 M0R082 166 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 THBDP07204 575 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 GRPRP30550 384 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 ALKBH2Q6NS38 261 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 DEF8Q6ZN54 512 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 WFDC8Q8IUA0 241 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 C10orf53Q8N6V4 93 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 ZNF417Q8TAU3 575 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 TMEM45BQ96B21 275 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 PIK3IP1Q96FE7 263 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 ZNF385AQ96PM9 386 aaKnown RBP18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 ZNF587Q96SQ5 575 aaPredicted RBP18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 KCTD14Q9BQ13 255 aaPredicted RBP18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 TMEM43Q9BTV4 400 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 PCDHAC1Q9H158 963 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 SEC14L4Q9UDX3 406 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 SLC7A7Q9UM01 511 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 DEFB108AA8MXU0 73 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 CXCR6O00574 342 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 SIAH2O43255 324 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 SHOX2O60902 331 aaPredicted RBP18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 IGHV1-2P23083 117 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 OR1E2P47887 323 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 IL1RL1Q01638 556 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 MFSD13AQ14CX5 517 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 AAED1Q7RTV5 226 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 TSPYL5Q86VY4 417 aaPredicted RBP18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 KDM8Q8N371 416 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 LZICQ8WZA0 190 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 SPAG4Q9NPE6 437 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 ASB6Q9NWX5 421 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 ADA2Q9NZK5 511 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 ABCD2Q9UBJ2 740 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 UPB1Q9UBR1 384 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 TAGLN3Q9UI15 199 aa18.3■□□□□ 0.52
HCFC1R1-208ENST00000575214 FREM1Q5H8C1 2179 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 CSMD2Q7Z408 3487 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 FZD7O75084 574 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 BGLAPP02818 100 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 THY1P04216 161 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 COX5AP20674 150 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 TAS2R41P59536 307 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 FAPQ12884 760 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 STK11Q15831 433 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 GKAP1Q5VSY0 366 aaPredicted RBP18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 TTC33Q6PID6 262 aaPredicted RBP18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 LINC00114Q6XXX2 140 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 WDR88Q6ZMY6 472 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 CREB3L2Q70SY1 520 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 ANKS4BQ8N8V4 417 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 ZIC4Q8N9L1 334 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 OR6S1Q8NH40 331 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 SLC41A3Q96GZ6 507 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 ASPNQ9BXN1 380 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 ARL8BQ9NVJ2 186 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 MALT1Q9UDY8 824 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 ITGB1BP2Q9UKP3 347 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 B3GALT5Q9Y2C3 310 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 CORINQ9Y5Q5 1042 aa18.29■□□□□ 0.52
HCFC1R1-208ENST00000575214 CIB4A0PJX0 185 aa18.28■□□□□ 0.52
HCFC1R1-208ENST00000575214 LYPD3O95274 346 aa18.28■□□□□ 0.52
HCFC1R1-208ENST00000575214 ZNF682O95780 498 aa18.28■□□□□ 0.52
HCFC1R1-208ENST00000575214 FAM107AO95990 144 aa18.28■□□□□ 0.52
HCFC1R1-208ENST00000575214 NQO1P15559 274 aaKnown RBP18.28■□□□□ 0.52
HCFC1R1-208ENST00000575214 ZNF43P17038 809 aa18.28■□□□□ 0.52
HCFC1R1-208ENST00000575214 DNAJA1P31689 397 aaKnown RBP18.28■□□□□ 0.52
HCFC1R1-208ENST00000575214 SELENOWP63302 87 aa18.28■□□□□ 0.52
HCFC1R1-208ENST00000575214 BEX5Q5H9J7 111 aa18.28■□□□□ 0.52
HCFC1R1-208ENST00000575214 TSPO2Q5TGU0 170 aa18.28■□□□□ 0.52
HCFC1R1-208ENST00000575214 H1FNTQ75WM6 255 aaPredicted RBP18.28■□□□□ 0.52
HCFC1R1-208ENST00000575214 ZNF433Q8N7K0 673 aaPredicted RBP18.28■□□□□ 0.52
HCFC1R1-208ENST00000575214 HSD17B8Q92506 261 aa18.28■□□□□ 0.52
HCFC1R1-208ENST00000575214 MPP4Q96JB8 637 aa18.28■□□□□ 0.52
HCFC1R1-208ENST00000575214 USB1Q9BQ65 265 aaKnown RBP18.28■□□□□ 0.52
HCFC1R1-208ENST00000575214 LIME1Q9H400 295 aa18.28■□□□□ 0.52
HCFC1R1-208ENST00000575214 A0A1W2PPR1 153 aa18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 LRRN3E7EW58 273 aa18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 KPNA4O00629 521 aaPredicted RBP18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 RAD51DO75771 328 aa18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 GGT1P19440 569 aa18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 LTBQ06643 244 aa18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 C1DQ13901 141 aaKnown RBP18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 TAB1Q15750 504 aa18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 NIPAL3Q6P499 406 aa18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 EPHX4Q8IUS5 362 aa18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 LURAP1LQ8IV03 231 aa18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 FAM162AQ96A26 154 aa18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 OXGR1Q96P68 337 aa18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 MOGAT1Q96PD6 335 aa18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 POLR2J2Q9GZM3 115 aaKnown RBP18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 POLR2J3Q9H1A7 115 aaKnown RBP18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 SLCO5A1Q9H2Y9 848 aa18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 SLC7A10Q9NS82 523 aa18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 FAM53CQ9NYF3 392 aa18.27■□□□□ 0.51
HCFC1R1-208ENST00000575214 TAS2R16Q9NYV7 291 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms