RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 PSME3P61289 254 aa18.27■□□□□ 0.52
CHMP6-204ENST00000572778 C8orf82Q6P1X6 216 aaPredicted RBP18.27■□□□□ 0.52
CHMP6-204ENST00000572778 AAED1Q7RTV5 226 aa18.27■□□□□ 0.52
CHMP6-204ENST00000572778 KDM8Q8N371 416 aa18.27■□□□□ 0.52
CHMP6-204ENST00000572778 C10orf53Q8N6V4 93 aa18.27■□□□□ 0.52
CHMP6-204ENST00000572778 ZIC4Q8N9L1 334 aa18.27■□□□□ 0.52
CHMP6-204ENST00000572778 TPD52L3Q96J77 140 aa18.27■□□□□ 0.52
CHMP6-204ENST00000572778 LRRC37BQ96QE4 947 aa18.27■□□□□ 0.52
CHMP6-204ENST00000572778 ASB6Q9NWX5 421 aa18.27■□□□□ 0.52
CHMP6-204ENST00000572778 UPB1Q9UBR1 384 aa18.27■□□□□ 0.52
CHMP6-204ENST00000572778 SEC14L4Q9UDX3 406 aa18.27■□□□□ 0.52
CHMP6-204ENST00000572778 TRAPPC13A5PLN9 417 aa18.26■□□□□ 0.51
CHMP6-204ENST00000572778 M0R082 166 aa18.26■□□□□ 0.51
CHMP6-204ENST00000572778 NDUFAB1O14561 156 aa18.26■□□□□ 0.51
CHMP6-204ENST00000572778 SHOX2O60902 331 aaPredicted RBP18.26■□□□□ 0.51
CHMP6-204ENST00000572778 DCTN3O75935 186 aa18.26■□□□□ 0.51
CHMP6-204ENST00000572778 DNAJA1P31689 397 aaKnown RBP18.26■□□□□ 0.51
CHMP6-204ENST00000572778 OR1E2P47887 323 aa18.26■□□□□ 0.51
CHMP6-204ENST00000572778 GSK3BP49841 420 aa18.26■□□□□ 0.51
CHMP6-204ENST00000572778 IL1RL1Q01638 556 aa18.26■□□□□ 0.51
CHMP6-204ENST00000572778 FAPQ12884 760 aa18.26■□□□□ 0.51
CHMP6-204ENST00000572778 STK11Q15831 433 aa18.26■□□□□ 0.51
CHMP6-204ENST00000572778 DEF8Q6ZN54 512 aa18.26■□□□□ 0.51
CHMP6-204ENST00000572778 ZNF417Q8TAU3 575 aa18.26■□□□□ 0.51
CHMP6-204ENST00000572778 TMEM45BQ96B21 275 aa18.26■□□□□ 0.51
CHMP6-204ENST00000572778 ZNF587Q96SQ5 575 aaPredicted RBP18.26■□□□□ 0.51
CHMP6-204ENST00000572778 TMEM43Q9BTV4 400 aa18.26■□□□□ 0.51
CHMP6-204ENST00000572778 ALG2Q9H553 416 aa18.26■□□□□ 0.51
CHMP6-204ENST00000572778 SLC7A7Q9UM01 511 aa18.26■□□□□ 0.51
CHMP6-204ENST00000572778 CXCR6O00574 342 aa18.25■□□□□ 0.51
CHMP6-204ENST00000572778 THY1P04216 161 aa18.25■□□□□ 0.51
CHMP6-204ENST00000572778 COX5AP20674 150 aa18.25■□□□□ 0.51
CHMP6-204ENST00000572778 TAB1Q15750 504 aa18.25■□□□□ 0.51
CHMP6-204ENST00000572778 TSPO2Q5TGU0 170 aa18.25■□□□□ 0.51
CHMP6-204ENST00000572778 CREB3L2Q70SY1 520 aa18.25■□□□□ 0.51
CHMP6-204ENST00000572778 H1FNTQ75WM6 255 aaPredicted RBP18.25■□□□□ 0.51
CHMP6-204ENST00000572778 TSPYL5Q86VY4 417 aaPredicted RBP18.25■□□□□ 0.51
CHMP6-204ENST00000572778 OR6S1Q8NH40 331 aa18.25■□□□□ 0.51
CHMP6-204ENST00000572778 HSD17B8Q92506 261 aa18.25■□□□□ 0.51
CHMP6-204ENST00000572778 CCT8L2Q96SF2 557 aa18.25■□□□□ 0.51
CHMP6-204ENST00000572778 KCTD14Q9BQ13 255 aaPredicted RBP18.25■□□□□ 0.51
CHMP6-204ENST00000572778 USB1Q9BQ65 265 aaKnown RBP18.25■□□□□ 0.51
CHMP6-204ENST00000572778 PCDHAC1Q9H158 963 aa18.25■□□□□ 0.51
CHMP6-204ENST00000572778 SLC7A10Q9NS82 523 aa18.25■□□□□ 0.51
CHMP6-204ENST00000572778 CSMD2Q7Z408 3487 aa18.25■□□□□ 0.51
CHMP6-204ENST00000572778 LRBAP50851 2863 aa18.25■□□□□ 0.51
CHMP6-204ENST00000572778 A0A1W2PPR1 153 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 CIB4A0PJX0 185 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 KLF4O43474 513 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 LYPD3O95274 346 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 NQO1P15559 274 aaKnown RBP18.24■□□□□ 0.51
CHMP6-204ENST00000572778 ZNF43P17038 809 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 GGT1P19440 569 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 TAS2R41P59536 307 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 SELENOWP63302 87 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 LTBQ06643 244 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 C1DQ13901 141 aaKnown RBP18.24■□□□□ 0.51
CHMP6-204ENST00000572778 MFSD13AQ14CX5 517 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 BEX5Q5H9J7 111 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 TTC33Q6PID6 262 aaPredicted RBP18.24■□□□□ 0.51
CHMP6-204ENST00000572778 LINC00114Q6XXX2 140 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 WDR88Q6ZMY6 472 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 EPHX4Q8IUS5 362 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 ZNF433Q8N7K0 673 aaPredicted RBP18.24■□□□□ 0.51
CHMP6-204ENST00000572778 LZICQ8WZA0 190 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 SLC41A3Q96GZ6 507 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 OXGR1Q96P68 337 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 ASPNQ9BXN1 380 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 PLEKHF2Q9H8W4 249 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 ST6GALNAC2Q9UJ37 374 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 EDARQ9UNE0 448 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 B3GALT5Q9Y2C3 310 aa18.24■□□□□ 0.51
CHMP6-204ENST00000572778 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.23■□□□□ 0.51
CHMP6-204ENST00000572778 ENO4A6NNW6 628 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 LRRN3E7EW58 273 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 FZD7O75084 574 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 RAD51DO75771 328 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 BGLAPP02818 100 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 FOXG1P55316 489 aaPredicted RBP18.23■□□□□ 0.51
CHMP6-204ENST00000572778 FOXD4Q12950 439 aaPredicted RBP18.23■□□□□ 0.51
CHMP6-204ENST00000572778 C9orf135Q5VTT2 229 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 NIPAL3Q6P499 406 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 PLPPR2Q96GM1 343 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 MPP4Q96JB8 637 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 HS3ST6Q96QI5 342 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 SPAG4Q9NPE6 437 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 ARL8BQ9NVJ2 186 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 TAS2R16Q9NYV7 291 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 ADA2Q9NZK5 511 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 ABCD2Q9UBJ2 740 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 MALT1Q9UDY8 824 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 TAGLN3Q9UI15 199 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 PLEKHA6Q9Y2H5 1048 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 CORINQ9Y5Q5 1042 aa18.23■□□□□ 0.51
CHMP6-204ENST00000572778 MPDZO75970 2070 aa18.22■□□□□ 0.51
CHMP6-204ENST00000572778 PDZD2O15018 2839 aa18.22■□□□□ 0.51
CHMP6-204ENST00000572778 POLQO75417 2590 aa18.22■□□□□ 0.51
CHMP6-204ENST00000572778 KPNA4O00629 521 aaPredicted RBP18.22■□□□□ 0.51
CHMP6-204ENST00000572778 KRT33AO76009 404 aa18.22■□□□□ 0.51
CHMP6-204ENST00000572778 ZNF682O95780 498 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms