RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 MED27Q6P2C8 311 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 TRIM40Q6P9F5 258 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 EMBQ6PCB8 327 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 TIFABQ6ZNK6 161 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 TMPRSS11FQ6ZWK6 438 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 NDUFAF7Q7L592 441 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 MTERF4Q7Z6M4 381 aaKnown RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 CMC1Q7Z7K0 106 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 CROCCP2Q86T23 111 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 TMPRSS11BQ86T26 416 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 SLC22A9Q8IVM8 553 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 TEX9Q8N6V9 391 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 ZNF614Q8N883 585 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 OR10S1Q8NGN2 331 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 OR9A4Q8NGU2 314 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 NT5CQ8TCD5 201 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 DCAKDQ8WVC6 231 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 KCTD4Q8WVF5 259 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 EXT2Q93063 718 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 NXNL1Q96CM4 212 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 CCDC126Q96EE4 140 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 MOCOSQ96EN8 888 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 WDR34Q96EX3 536 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 CMTM7Q96FZ5 175 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 C10orf90Q96M02 699 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 AGAP4Q96P64 663 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 MS4A10Q96PG2 267 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 MCRIP2Q9BUT9 160 aaKnown RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 FNDC11Q9BVV2 318 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 ROPN1BQ9BZX4 212 aaPredicted RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 IQCGQ9H095 443 aaKnown RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 ACTR8Q9H981 624 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 AKIRIN1Q9H9L7 192 aaPredicted RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 COPS7BQ9H9Q2 264 aaPredicted RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 ROPN1Q9HAT0 212 aaPredicted RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 PLCXD1Q9NUJ7 323 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 NMRK1Q9NWW6 199 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 P4HTMQ9NXG6 502 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 GPR83Q9NYM4 423 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 AHSPQ9NZD4 102 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 C5AR2Q9P296 337 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 CTSFQ9UBX1 484 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 TEKT2Q9UIF3 430 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 ANAPC2Q9UJX6 822 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 C3orf18Q9UK00 162 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 PTBP2Q9UKA9 531 aaKnown RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 GRID1Q9ULK0 1009 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 MRPS33Q9Y291 106 aaKnown RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 STK38LQ9Y2H1 464 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 NAALAD2Q9Y3Q0 740 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 ATMQ13315 3056 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 MGAQ8IWI9 3026 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 PKD1L2Q7Z442 2459 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 SDK2Q58EX2 2172 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 IDSB3KWA1 339 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 H0YIV9 168 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 H3BQF6 201 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 SGK494L7N484 410 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 TAPBPO15533 448 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 ERI3O43414 337 aaKnown RBP3.44□□□□□ -1.86
NUP88-202ENST00000570937 CDH16O75309 829 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 DFFBO76075 338 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 CLDN9O95484 217 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 OTCP00480 354 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 HPP00738 406 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 FHP07954 510 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 RNH1P13489 461 aaKnown RBP3.44□□□□□ -1.86
NUP88-202ENST00000570937 IL1RNP18510 177 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 CALRP27797 417 aaKnown RBP3.44□□□□□ -1.86
NUP88-202ENST00000570937 MAGEA12P43365 314 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 TSFMP43897 325 aaKnown RBP3.44□□□□□ -1.86
NUP88-202ENST00000570937 SLC9A3P48764 834 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 RAP1GDS1P52306 607 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 MTTPP55157 894 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 TPD52P55327 224 aaPredicted RBP3.44□□□□□ -1.86
NUP88-202ENST00000570937 HSD17B7P56937 341 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 RAB8AP61006 207 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 HERVK_113P63132 956 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 REEP5Q00765 189 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 ASPHQ12797 758 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 BIKQ13323 160 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 RASA2Q15283 850 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 NSDHLQ15738 373 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 EXT1Q16394 746 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 CCDC153Q494R4 210 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 IGSF11Q5DX21 431 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 VWA2Q5GFL6 755 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 TOR1AIP1Q5JTV8 583 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 ATP1A1-AS1Q5TC04 95 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 ISLR2Q6UXK2 745 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 SHISA6Q6ZSJ9 500 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 Q6ZSR9 355 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 VN1R4Q7Z5H5 301 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 CPEB2Q7Z5Q1 589 aaKnown RBP3.44□□□□□ -1.86
NUP88-202ENST00000570937 NUDT13Q86X67 352 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 EGFL6Q8IUX8 553 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 PRSS58Q8IYP2 241 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 CENPLQ8N0S6 344 aaPredicted RBP3.44□□□□□ -1.86
NUP88-202ENST00000570937 TAGAPQ8N103 731 aa3.44□□□□□ -1.86
NUP88-202ENST00000570937 ARHGAP24Q8N264 748 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms