RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 TRPC5OSA6NMA1 111 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 TMEM229AB2RXF0 380 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 NR5A2O00482 541 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 FRS3O43559 492 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 UPK3AO75631 287 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 BCHEP06276 602 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 CRISP3P54108 245 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 DSTNP60981 165 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 COPZ1P61923 177 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 LSM11P83369 360 aaKnown RBP eCLIP12.87□□□□□ -0.35
NDE1-203ENST00000570727 TBRG1Q3YBR2 411 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 SLC9B1Q4ZJI4 515 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 RPS26P11Q5JNZ5 115 aaPredicted RBP12.87□□□□□ -0.35
NDE1-203ENST00000570727 RNF220Q5VTB9 566 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 ANKRD16Q6P6B7 361 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 KLHL24Q6TFL4 600 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 ABHD12BQ7Z5M8 362 aaPredicted RBP12.87□□□□□ -0.35
NDE1-203ENST00000570727 SERPINA11Q86U17 422 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 KDM8Q8N371 416 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 TMEM158Q8WZ71 300 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 VPS33AQ96AX1 596 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 TMEM19Q96HH6 336 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 SORCS2Q96PQ0 1159 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 SLC38A2Q96QD8 506 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 SPATA9Q9BWV2 254 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 OBP2BQ9NPH6 170 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 RAB21Q9UL25 225 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 ZNF232Q9UNY5 417 aa12.87□□□□□ -0.35
NDE1-203ENST00000570727 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.87□□□□□ -0.352e-8■■■■□ 20.1
NDE1-203ENST00000570727 ANK2Q01484 3957 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 A0A0G2JPF8 293 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 HNRNPCL2B2RXH8 293 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 HNRNPCL3B7ZW38 293 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 FTCDNL1E5RQL4 147 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 PHF1O43189 567 aaPredicted RBP12.86□□□□□ -0.35
NDE1-203ENST00000570727 HNRNPCL1O60812 293 aaKnown RBP12.86□□□□□ -0.35
NDE1-203ENST00000570727 KRT33AO76009 404 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 VAMP5O95183 116 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 CSF3P09919 207 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 HNRNPCL4P0DMR1 293 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 IDO1P14902 403 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 EGR4Q05215 589 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 LARS2Q15031 903 aaKnown RBP12.86□□□□□ -0.35
NDE1-203ENST00000570727 ZSWIM7Q19AV6 140 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 NXNQ6DKJ4 435 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 NIPAL3Q6P499 406 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 MAVSQ7Z434 540 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 ARIH2OSQ8N7S6 290 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 MFSD8Q8NHS3 518 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 MAGEE2Q8TD90 523 aaPredicted RBP12.86□□□□□ -0.35
NDE1-203ENST00000570727 STK35Q8TDR2 534 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 FOXN4Q96NZ1 517 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 PTDSS2Q9BVG9 487 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 BEX2Q9BXY8 128 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 LINC00470Q9BZP3 86 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 NELFAQ9H3P2 528 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 SDR39U1Q9NRG7 319 aaPredicted RBP12.86□□□□□ -0.35
NDE1-203ENST00000570727 CRNNQ9UBG3 495 aaPredicted RBP12.86□□□□□ -0.35
NDE1-203ENST00000570727 RASD1Q9Y272 281 aa12.86□□□□□ -0.35
NDE1-203ENST00000570727 ARPC4-TTLL3A0A0A6YYG9 625 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 TMEM120BA0PK00 339 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 ZNF587BE7ETH6 402 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 SLCO1B7G3V0H7 640 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 LMX1BO60663 402 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 ZNF432O94892 652 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 ANP32DO95626 131 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 IGLV1-44P01699 117 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 NUDT7P0C024 238 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 CALCRP30988 508 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 SERPINF1P36955 418 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 NR4A2P43354 598 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 PDLIM4P50479 330 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 TUBA1BP68363 451 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 TUBA4AP68366 448 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 HOXC5Q00444 222 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 ADIPOQQ15848 244 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 C3orf36Q3SXR2 165 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 PRAMEF8Q5VWM4 474 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 PRAMEF7Q5VXH5 474 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 TUBA1AQ71U36 451 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 OR9I1Q8NGQ6 314 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 KTI12Q96EK9 354 aaPredicted RBP12.85□□□□□ -0.35
NDE1-203ENST00000570727 ITCHQ96J02 903 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 ALKBH3Q96Q83 286 aaPredicted RBP12.85□□□□□ -0.35
NDE1-203ENST00000570727 OR52B2Q96RD2 323 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 KATNB1Q9BVA0 655 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 PRR14Q9BWN1 585 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 SEC61A2Q9H9S3 476 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 CA10Q9NS85 328 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 ZIM2Q9NZV7 527 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 PCDHB14Q9Y5E9 798 aa12.85□□□□□ -0.35
NDE1-203ENST00000570727 A0A096LPE4 126 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 A0A096LPI6 279 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 A0A1W2PPZ6 126 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 SLC35F4A4IF30 521 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 OR6C65A6NJZ3 312 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 FZD7O75084 574 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 CRYAAP02489 173 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 CECR9P0C854 216 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 PNMTP11086 282 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms