RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 SPATA5L1Q9BVQ7 753 aa12.72□□□□□ -0.37
CMTM3-215ENST00000568477 SF3B5Q9BWJ5 86 aaKnown RBP12.72□□□□□ -0.37
CMTM3-215ENST00000568477 C1orf21Q9H246 121 aa12.72□□□□□ -0.37
CMTM3-215ENST00000568477 ZNF701Q9NV72 531 aaPredicted RBP12.72□□□□□ -0.37
CMTM3-215ENST00000568477 ADPRHL2Q9NX46 363 aa12.72□□□□□ -0.37
CMTM3-215ENST00000568477 UPB1Q9UBR1 384 aa12.72□□□□□ -0.37
CMTM3-215ENST00000568477 RPS6KB2Q9UBS0 482 aa12.72□□□□□ -0.37
CMTM3-215ENST00000568477 LAMP3Q9UQV4 416 aa12.72□□□□□ -0.37
CMTM3-215ENST00000568477 NIPBLQ6KC79 2804 aaeCLIP12.72□□□□□ -0.37
CMTM3-215ENST00000568477 ELOA3DA6NLF2 546 aaPredicted RBP12.71□□□□□ -0.37
CMTM3-215ENST00000568477 NPIPB7O75200 414 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 ITGA5P08648 1049 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 PAX1P15863 534 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 GPX2P18283 190 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 SCARB2Q14108 478 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 ELOA3BQ3SY89 546 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 TMEM225Q6GV28 225 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 OR7E24Q6IFN5 339 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 DHRS4L2Q6PKH6 230 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 GPAT4Q86UL3 456 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 C10orf111Q8N326 155 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 ELOA3Q8NG57 546 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 OR52N5Q8NH56 324 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 NEUROG1Q92886 237 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 IKZF5Q9H5V7 419 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 PIF1Q9H611 641 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 TMEM38AQ9H6F2 299 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 SLC7A10Q9NS82 523 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 NPAP1Q9NZP6 1156 aa12.71□□□□□ -0.37
CMTM3-215ENST00000568477 LEF1Q9UJU2 399 aaPredicted RBP12.71□□□□□ -0.37
CMTM3-215ENST00000568477 CSPG4Q6UVK1 2322 aa12.71□□□□□ -0.38
CMTM3-215ENST00000568477 NSD1Q96L73 2696 aaPredicted RBP12.7□□□□□ -0.38
CMTM3-215ENST00000568477 PRORSD1PA6NEY8 169 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 B2RBV5 119 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 H7C1Q1 480 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 PDLIM1O00151 329 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 ANGPT2O15123 496 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 GYG2O15488 501 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 VAMP5O95183 116 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 SLC6A2P23975 617 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 FOXG1P55316 489 aaPredicted RBP12.7□□□□□ -0.38
CMTM3-215ENST00000568477 ATP5J2P56134 94 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 TGFBR3Q03167 851 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 GABRA6Q16445 453 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 TSPO2Q5TGU0 170 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 C9orf135Q5VTT2 229 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 KLHL17Q6TDP4 642 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 TMEM108Q6UXF1 575 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 DLEU7Q6UYE1 221 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 AAED1Q7RTV5 226 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 DHDDSQ86SQ9 333 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 C10orf67Q8IYJ2 551 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 C17orf78Q8N4C9 275 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 ZIC4Q8N9L1 334 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 POMGNT2Q8NAT1 580 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 HIPK4Q8NE63 616 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 C1orf162Q8NEQ5 155 aaPredicted RBP12.7□□□□□ -0.38
CMTM3-215ENST00000568477 MFSD8Q8NHS3 518 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 SMAP2Q8WU79 429 aaPredicted RBP12.7□□□□□ -0.38
CMTM3-215ENST00000568477 COX4I2Q96KJ9 171 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 MUS81Q96NY9 551 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 ZNF385AQ96PM9 386 aaKnown RBP12.7□□□□□ -0.38
CMTM3-215ENST00000568477 ZNF607Q96SK3 696 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 CPPED1Q9BRF8 314 aaPredicted RBP12.7□□□□□ -0.38
CMTM3-215ENST00000568477 BDH2Q9BUT1 245 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 TRIM2Q9C040 744 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 SLCO5A1Q9H2Y9 848 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 C12orf10Q9HB07 376 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 TAS2R1Q9NYW7 299 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 SLC13A4Q9UKG4 626 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 RASD1Q9Y272 281 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 NDUFAF1Q9Y375 327 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 SLC25A15Q9Y619 301 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 VPS13CQ709C8 3753 aa12.7□□□□□ -0.38
CMTM3-215ENST00000568477 A0A1B0GWA3 101 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 FAM171A2A8MVW0 826 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 ABCD4O14678 606 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 GSC2O15499 205 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 SERPINB7O75635 380 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 SOD3P08294 240 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 DANCRP0C864 163 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 COX4I1P13073 169 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 PTAFRP25105 342 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 GTF2E2P29084 291 aaKnown RBP12.69□□□□□ -0.38
CMTM3-215ENST00000568477 ZNF83P51522 516 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 CDH11P55287 796 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 ELF3P78545 371 aaPredicted RBP12.69□□□□□ -0.38
CMTM3-215ENST00000568477 DNAL1Q4LDG9 190 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 RUNDC3AQ59EK9 446 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 C5orf46Q6UWT4 87 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 RINLQ6ZS11 566 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 ABHD12BQ7Z5M8 362 aaPredicted RBP12.69□□□□□ -0.38
CMTM3-215ENST00000568477 ARHGAP24Q8N264 748 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 DPP10Q8N608 796 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 LSMEM1Q8N8F7 131 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 BHLHE22Q8NFJ8 381 aaPredicted RBP12.69□□□□□ -0.38
CMTM3-215ENST00000568477 RP9Q8TA86 221 aaKnown RBP12.69□□□□□ -0.38
CMTM3-215ENST00000568477 GTPBP3Q969Y2 492 aaKnown RBP12.69□□□□□ -0.38
CMTM3-215ENST00000568477 SLC25A36Q96CQ1 311 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 RADILQ96JH8 1075 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms