RNA–Protein interactions for RNA: ENST00000567269.5

CDH16-206, Transcript of cadherin 16, humanhuman

TSL 2

Gene CDH16, Length 3,539 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-206ENST00000567269 ABCD3P28288 659 aa11.04□□□□□ -0.64
CDH16-206ENST00000567269 NR4A2P43354 598 aa11.04□□□□□ -0.64
CDH16-206ENST00000567269 PRPS1P60891 318 aa11.04□□□□□ -0.64
CDH16-206ENST00000567269 ZNF117Q03924 483 aa11.04□□□□□ -0.64
CDH16-206ENST00000567269 SKP2Q13309 424 aa11.04□□□□□ -0.64
CDH16-206ENST00000567269 TMEM71Q6P5X7 295 aa11.04□□□□□ -0.64
CDH16-206ENST00000567269 IL20RBQ6UXL0 311 aa11.04□□□□□ -0.64
CDH16-206ENST00000567269 SSX6Q7RTT6 188 aa11.04□□□□□ -0.64
CDH16-206ENST00000567269 SLITRK4Q8IW52 837 aa11.04□□□□□ -0.64
CDH16-206ENST00000567269 CADM3Q8N126 398 aa11.04□□□□□ -0.64
CDH16-206ENST00000567269 SLC38A9Q8NBW4 561 aa11.04□□□□□ -0.64
CDH16-206ENST00000567269 OR5J2Q8NH18 312 aa11.04□□□□□ -0.64
CDH16-206ENST00000567269 HOXB13Q92826 284 aaPredicted RBP11.04□□□□□ -0.64
CDH16-206ENST00000567269 DUSP23Q9BVJ7 150 aa11.04□□□□□ -0.64
CDH16-206ENST00000567269 SDK2Q58EX2 2172 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 OR6C68A6NDL8 312 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 OR6A2O95222 327 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 TIAF1O95411 115 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 CLPSP04118 112 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 IFI6P09912 130 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 GIMD1P0DJR0 217 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 EPHA8P29322 1005 aaPredicted RBP11.03□□□□□ -0.64
CDH16-206ENST00000567269 EFNA3P52797 238 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 ACY1Q03154 408 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 C1QL3Q5VWW1 255 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 SIGIRRQ6IA17 410 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 GPALPP1Q8IXQ4 340 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 LSM14AQ8ND56 463 aaKnown RBP11.03□□□□□ -0.64
CDH16-206ENST00000567269 C17orf47Q8NEP4 570 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 EDAQ92838 391 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 KISS1RQ969F8 398 aaPredicted RBP11.03□□□□□ -0.64
CDH16-206ENST00000567269 ZNF426Q9BUY5 554 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 PLEKHB1Q9UF11 243 aaPredicted RBP11.03□□□□□ -0.64
CDH16-206ENST00000567269 IKZF2Q9UKS7 526 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 GTF2A1LQ9UNN4 478 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 SRPK3Q9UPE1 567 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 TVP23AA6NH52 213 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 CDK2AP1O14519 115 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 ARHGEF9O43307 516 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 SSX4O60224 188 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 EDNRAP25101 427 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 RPS27P42677 84 aaKnown RBP11.03□□□□□ -0.64
CDH16-206ENST00000567269 LIMK1P53667 647 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 PWWP2BQ6NUJ5 590 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 DPY19L2P2Q6ZN68 376 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 MINDY2Q8NBR6 621 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 OR1N1Q8NGS0 311 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 GHSRQ92847 366 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 EVA1AQ9H8M9 152 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 CFAP54Q96N23 3096 aa11.03□□□□□ -0.64
CDH16-206ENST00000567269 IGKV3-11P04433 115 aa11.02□□□□□ -0.64
CDH16-206ENST00000567269 SPNP16150 400 aa11.02□□□□□ -0.64
CDH16-206ENST00000567269 GBX2P52951 348 aaPredicted RBP11.02□□□□□ -0.64
CDH16-206ENST00000567269 KRR1Q13601 381 aaKnown RBP11.02□□□□□ -0.64
CDH16-206ENST00000567269 BAK1Q16611 211 aa11.02□□□□□ -0.64
CDH16-206ENST00000567269 ODF4Q2M2E3 257 aa11.02□□□□□ -0.64
CDH16-206ENST00000567269 LCN1P1Q5VSP4 162 aa11.02□□□□□ -0.64
CDH16-206ENST00000567269 TRIQKQ629K1 86 aa11.02□□□□□ -0.64
CDH16-206ENST00000567269 WDR74Q6RFH5 385 aaPredicted RBP11.02□□□□□ -0.64
CDH16-206ENST00000567269 ZNF574Q6ZN55 896 aaPredicted RBP11.02□□□□□ -0.64
CDH16-206ENST00000567269 SYT9Q86SS6 491 aa11.02□□□□□ -0.64
CDH16-206ENST00000567269 SLC35F2Q8IXU6 374 aa11.02□□□□□ -0.64
CDH16-206ENST00000567269 APMAPQ9HDC9 416 aa11.02□□□□□ -0.64
CDH16-206ENST00000567269 CHRNA9Q9UGM1 479 aa11.02□□□□□ -0.64
CDH16-206ENST00000567269 VDAC3Q9Y277 283 aa11.02□□□□□ -0.64
CDH16-206ENST00000567269 MRPS7Q9Y2R9 242 aaKnown RBP11.02□□□□□ -0.64
CDH16-206ENST00000567269 TRBV2A0A0J9YWF9 115 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 F8A1P23610 371 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 ACTC1P68032 377 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 ACTA1P68133 377 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 IGSF11Q5DX21 431 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 CEP78Q5JTW2 689 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 CNIH2Q6PI25 160 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 UBALD2Q8IYN6 164 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 C19orf18Q8NEA5 215 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 ADIPOR1Q96A54 375 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 ISYNA1Q9NPH2 558 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 SUSD2Q9UGT4 822 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 KLHL21Q9UJP4 597 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 IGKV3D-11A0A0A0MRZ8 115 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 IQCMA0A1B0GVH7 501 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 A0A1W2PQ09 198 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 CCDC182A6NF36 153 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 XKRYO14609 159 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 GDF9O60383 454 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 SPI1P17947 270 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 PGCP20142 388 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 EMP2P54851 167 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 SHBQ15464 509 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 ZNF74Q16587 644 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 MZT2AQ6P582 158 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 PDCD1LG2Q9BQ51 273 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 CRB3Q9BUF7 120 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 TEKT2Q9UIF3 430 aa11.02□□□□□ -0.65
CDH16-206ENST00000567269 TMEM131Q92545 1883 aa11.01□□□□□ -0.65
CDH16-206ENST00000567269 IGKV1D-42A0A075B6H8 117 aa11.01□□□□□ -0.65
CDH16-206ENST00000567269 LOC105371267A0A1B0GV96 52 aa11.01□□□□□ -0.65
CDH16-206ENST00000567269 A0A1W2PQM1 296 aa11.01□□□□□ -0.65
CDH16-206ENST00000567269 SHISA3A0PJX4 238 aa11.01□□□□□ -0.65
CDH16-206ENST00000567269 APEX1P27695 318 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms