RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 SAMD14Q8IZD0 417 aaPredicted RBP3.76□□□□□ -1.81
LINC00561-201ENST00000565815 IQCF1Q8N6M8 205 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 DENND6BQ8NEG7 585 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 GTF2H4Q92759 462 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 PSKH2Q96QS6 385 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 EPYCQ99645 322 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 GABARAPL3Q9BY60 117 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 HIPK2Q9H2X6 1198 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 DSN1Q9H410 356 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 DIABLOQ9NR28 239 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 CD274Q9NZQ7 290 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 SPATA7Q9P0W8 599 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 VDAC3Q9Y277 283 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 TRAPPC4Q9Y296 219 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 DHRS7Q9Y394 339 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 OARD1Q9Y530 152 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 SNX10Q9Y5X0 201 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 A0A075B6Q4 140 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 METTL15A6NJ78 407 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 CCL24O00175 119 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 SEC22BO75396 215 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 CLIC3O95833 236 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 TSPAN12O95859 305 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 SLC4A1P02730 911 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 FAM106CPP0CH98 169 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 NCK1P16333 377 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 ZNF24P17028 368 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 SOX6P35712 828 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 NKX2-1P43699 371 aaPredicted RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 RABIFP47224 123 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 NPY4RP50391 375 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 CLDN8P56748 225 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 B3GALT5-AS1P59052 145 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 IL5RAQ01344 420 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 CACNG1Q06432 222 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 SLC10A7Q0GE19 358 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 GTF2H2Q13888 395 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 TSNQ15631 228 aaKnown RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 NPTX1Q15818 432 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 MS4A13Q5J8X5 152 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 C10orf120Q5SQS8 335 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 THOC7Q6I9Y2 204 aaKnown RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 OR2T5Q6IEZ7 315 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 ZNF544Q6NX49 715 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 GTF2H2CQ6P1K8 395 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 SPESP1Q6UW49 350 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 KRT74Q7RTS7 529 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 SCD5Q86SK9 330 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 MMAAQ8IVH4 418 aaKnown RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 RYBPQ8N488 228 aaPredicted RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 OR11H4Q8NGC9 324 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 OR10S1Q8NGN2 331 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 OR2T29Q8NH02 315 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 MCFD2Q8NI22 146 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 FIBINQ8TAL6 211 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 OR8D1Q8WZ84 308 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 LGALS12Q96DT0 336 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 ZHX1-C8orf76Q96EF9 292 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 LMLNQ96KR4 655 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 IL17FQ96PD4 163 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 THUMPD3Q9BV44 507 aaKnown RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 C1QTNF4Q9BXJ3 329 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 SLIRPQ9GZT3 109 aaKnown RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 PDFQ9HBH1 243 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 IL1RAPQ9NPH3 570 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 ACOT13Q9NPJ3 140 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 KLK4Q9Y5K2 254 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 GMPPBQ9Y5P6 360 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 MYO18AQ92614 2054 aaKnown RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 APC2O95996 2303 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 USP34Q70CQ2 3546 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 TP53BP1Q12888 1972 aaPredicted RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 ILVBLA1L0T0 632 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 LILRA5A6NI73 299 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 EFCAB9A8MZ26 197 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 E5RI56 91 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 HAT1O14929 419 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 TRIM3O75382 744 aaPredicted RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 MYO1DO94832 1006 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 OR4F21O95013 312 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 SEMG1P04279 462 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 RPLP0P05388 317 aaKnown RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 ALPIP09923 528 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 GSTT2P0CG29 244 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 GSTT2BP0CG30 244 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 ZNF7P17097 686 aaPredicted RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 ACHEP22303 614 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 HNRNPA2B1P22626 353 aaKnown RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 RPS5P46782 204 aaKnown RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 YAP1P46937 504 aaKnown RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 GZMMP51124 257 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 ACSM1Q08AH1 577 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 ELAVL3Q14576 367 aaKnown RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 MAD2L1BPQ15013 274 aaPredicted RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 TWIST1Q15672 202 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 IMPG1Q17R60 797 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 CTU2Q2VPK5 515 aaKnown RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 DHRS7BQ6IAN0 325 aaPredicted RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 KIAA1161Q6NSJ0 714 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 FAHD1Q6P587 224 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms