RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 CSPG4Q6UVK1 2322 aa17.42■□□□□ 0.38
CLN6-206ENST00000565471 OR6C65A6NJZ3 312 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 RNF223E7ERA6 249 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 WNT11O96014 354 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 PCSK6P29122 969 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 PPP2R2BQ00005 443 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 SLC25A3Q00325 362 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 EGR4Q05215 589 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 PAGE3Q5JUK9 113 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 C11orf71Q6IPW1 123 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 REEP3Q6NUK4 255 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 ZNF544Q6NX49 715 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 DHRS4L2Q6PKH6 230 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 KLHL24Q6TFL4 600 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 C5orf46Q6UWT4 87 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 B3GLCTQ6Y288 498 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 KRT73Q86Y46 540 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 FBXL14Q8N1E6 418 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 LSMEM1Q8N8F7 131 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 NFKBIDQ8NI38 313 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 DYDC1Q8WWB3 177 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 STON2Q8WXE9 905 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 ADAD1Q96M93 576 aaKnown RBP17.41■□□□□ 0.38
CLN6-206ENST00000565471 PTDSS2Q9BVG9 487 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 SPATA5L1Q9BVQ7 753 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 C1QTNF6Q9BXI9 259 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 REG4Q9BYZ8 158 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 RPS6KB2Q9UBS0 482 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 GDF2Q9UK05 429 aaPredicted RBP17.41■□□□□ 0.38
CLN6-206ENST00000565471 PLCE1Q9P212 2302 aa17.41■□□□□ 0.38
CLN6-206ENST00000565471 TLN2Q9Y4G6 2542 aa17.4■□□□□ 0.38
CLN6-206ENST00000565471 ELOA3DA6NLF2 546 aaPredicted RBP17.4■□□□□ 0.38
CLN6-206ENST00000565471 NDUFS7O75251 213 aa17.4■□□□□ 0.38
CLN6-206ENST00000565471 PNMTP11086 282 aa17.4■□□□□ 0.38
CLN6-206ENST00000565471 GPX2P18283 190 aa17.4■□□□□ 0.38
CLN6-206ENST00000565471 PAX7P23759 505 aa17.4■□□□□ 0.38
CLN6-206ENST00000565471 HOXC5Q00444 222 aa17.4■□□□□ 0.38
CLN6-206ENST00000565471 CDK6Q00534 326 aa17.4■□□□□ 0.38
CLN6-206ENST00000565471 KRTAP1-1Q07627 177 aa17.4■□□□□ 0.38
CLN6-206ENST00000565471 SQLEQ14534 574 aa17.4■□□□□ 0.38
CLN6-206ENST00000565471 ELOA3BQ3SY89 546 aa17.4■□□□□ 0.38
CLN6-206ENST00000565471 EPHX4Q8IUS5 362 aa17.4■□□□□ 0.38
CLN6-206ENST00000565471 C10orf111Q8N326 155 aa17.4■□□□□ 0.38
CLN6-206ENST00000565471 MUC15Q8N387 334 aa17.4■□□□□ 0.38
CLN6-206ENST00000565471 ELOA3Q8NG57 546 aa17.4■□□□□ 0.38
CLN6-206ENST00000565471 RSPO3Q9BXY4 272 aaPredicted RBP17.4■□□□□ 0.38
CLN6-206ENST00000565471 TMEM38AQ9H6F2 299 aa17.4■□□□□ 0.38
CLN6-206ENST00000565471 FKRPQ9H9S5 495 aa17.4■□□□□ 0.38
CLN6-206ENST00000565471 INAFM1C9JVW0 142 aa17.39■□□□□ 0.37
CLN6-206ENST00000565471 ZNF587BE7ETH6 402 aa17.39■□□□□ 0.37
CLN6-206ENST00000565471 KRT33AO76009 404 aa17.39■□□□□ 0.37
CLN6-206ENST00000565471 PTNP21246 168 aa17.39■□□□□ 0.37
CLN6-206ENST00000565471 GTF2E2P29084 291 aaKnown RBP17.39■□□□□ 0.37
CLN6-206ENST00000565471 RPS5P46782 204 aaKnown RBP17.39■□□□□ 0.37
CLN6-206ENST00000565471 SELENOPP49908 381 aa17.39■□□□□ 0.37
CLN6-206ENST00000565471 FABP6P51161 128 aa17.39■□□□□ 0.37
CLN6-206ENST00000565471 AGKQ53H12 422 aa17.39■□□□□ 0.37
CLN6-206ENST00000565471 DNAJA4Q8WW22 397 aaPredicted RBP17.39■□□□□ 0.37
CLN6-206ENST00000565471 SLC25A36Q96CQ1 311 aa17.39■□□□□ 0.37
CLN6-206ENST00000565471 ZNF317Q96PQ6 595 aaPredicted RBP17.39■□□□□ 0.37
CLN6-206ENST00000565471 CACNG6Q9BXT2 260 aa17.39■□□□□ 0.37
CLN6-206ENST00000565471 LINC00470Q9BZP3 86 aa17.39■□□□□ 0.37
CLN6-206ENST00000565471 RABEP2Q9H5N1 569 aa17.39■□□□□ 0.37
CLN6-206ENST00000565471 RCE1Q9Y256 329 aa17.39■□□□□ 0.37
CLN6-206ENST00000565471 ZANQ9Y493 2812 aa17.39■□□□□ 0.37
CLN6-206ENST00000565471 A0A1B0GWA3 101 aa17.38■□□□□ 0.37
CLN6-206ENST00000565471 PRORSD1PA6NEY8 169 aa17.38■□□□□ 0.37
CLN6-206ENST00000565471 EVPLLA8MZ36 301 aa17.38■□□□□ 0.37
CLN6-206ENST00000565471 HMGB1P1B2RPK0 211 aaPredicted RBP17.38■□□□□ 0.37
CLN6-206ENST00000565471 OR2T1O43869 369 aa17.38■□□□□ 0.37
CLN6-206ENST00000565471 HTR2AP28223 471 aa17.38■□□□□ 0.37
CLN6-206ENST00000565471 SCARB2Q14108 478 aa17.38■□□□□ 0.37
CLN6-206ENST00000565471 HIKESHIQ53FT3 197 aa17.38■□□□□ 0.37
CLN6-206ENST00000565471 FAM69AQ5T7M9 428 aa17.38■□□□□ 0.37
CLN6-206ENST00000565471 NIPAL3Q6P499 406 aa17.38■□□□□ 0.37
CLN6-206ENST00000565471 COMTD1Q86VU5 262 aa17.38■□□□□ 0.37
CLN6-206ENST00000565471 BHLHE22Q8NFJ8 381 aaPredicted RBP17.38■□□□□ 0.37
CLN6-206ENST00000565471 OR1K1Q8NGR3 316 aa17.38■□□□□ 0.37
CLN6-206ENST00000565471 SLC38A4Q969I6 547 aa17.38■□□□□ 0.37
CLN6-206ENST00000565471 KTI12Q96EK9 354 aaPredicted RBP17.38■□□□□ 0.37
CLN6-206ENST00000565471 ALKBH3Q96Q83 286 aaPredicted RBP17.38■□□□□ 0.37
CLN6-206ENST00000565471 IKZF5Q9H5V7 419 aa17.38■□□□□ 0.37
CLN6-206ENST00000565471 INTS9Q9NV88 658 aaKnown RBP17.38■□□□□ 0.37
CLN6-206ENST00000565471 TESQ9UGI8 421 aaKnown RBP17.38■□□□□ 0.37
CLN6-206ENST00000565471 H7C417 338 aa17.37■□□□□ 0.37
CLN6-206ENST00000565471 TPST1O60507 370 aa17.37■□□□□ 0.37
CLN6-206ENST00000565471 CDH2P19022 906 aaPredicted RBP17.37■□□□□ 0.37
CLN6-206ENST00000565471 SLC6A2P23975 617 aa17.37■□□□□ 0.37
CLN6-206ENST00000565471 TBRG1Q3YBR2 411 aa17.37■□□□□ 0.37
CLN6-206ENST00000565471 ALG10BQ5I7T1 473 aa17.37■□□□□ 0.37
CLN6-206ENST00000565471 FAM91A1Q658Y4 838 aa17.37■□□□□ 0.37
CLN6-206ENST00000565471 NET1Q7Z628 596 aaPredicted RBP17.37■□□□□ 0.37
CLN6-206ENST00000565471 MAPK1IP1LQ8NDC0 245 aa17.37■□□□□ 0.37
CLN6-206ENST00000565471 ANKK1Q8NFD2 765 aa17.37■□□□□ 0.37
CLN6-206ENST00000565471 MAGEE2Q8TD90 523 aaPredicted RBP17.37■□□□□ 0.37
CLN6-206ENST00000565471 OXGR1Q96P68 337 aa17.37■□□□□ 0.37
CLN6-206ENST00000565471 ZNF607Q96SK3 696 aa17.37■□□□□ 0.37
CLN6-206ENST00000565471 EVA1AQ9H8M9 152 aa17.37■□□□□ 0.37
CLN6-206ENST00000565471 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.37■□□□□ 0.37
CLN6-206ENST00000565471 ATP23Q9Y6H3 246 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms