RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 OR6S1Q8NH40 331 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 TEX47Q8TBZ9 253 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 FANK1Q8TC84 345 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 SMPDL3BQ92485 455 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 TFAP2CQ92754 450 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 DNAJA3Q96EY1 480 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 MFRPQ9BY79 579 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 POTEKPQ9BYX7 375 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 GRIP2Q9C0E4 1043 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 EGLN3Q9H6Z9 239 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 TBC1D23Q9NUY8 699 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 FAM118AQ9NWS6 357 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 QPCTLQ9NXS2 382 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 ZNF337Q9Y3M9 751 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 LRRC42Q9Y546 428 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 CDH10Q9Y6N8 788 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 LOC100130705A0A1B0GUX0 176 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 GJE1A6NN92 205 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 TFECO14948 347 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-205ENST00000564899 OR2T1O43869 369 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 HCN1O60741 890 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 RCBTB2O95199 551 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 MT-ATP6P00846 226 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 BGLAPP02818 100 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 OPN1LWP04000 364 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 TP53P04637 393 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-205ENST00000564899 ZNF24P17028 368 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 GTF2E2P29084 291 aaKnown RBP9.97□□□□□ -0.81
SF3B3-205ENST00000564899 EPHA2P29317 976 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 SFTPDP35247 375 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 CLK1P49759 484 aaKnown RBP9.97□□□□□ -0.81
SF3B3-205ENST00000564899 TPD52P55327 224 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-205ENST00000564899 NUP107P57740 925 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 LTBQ06643 244 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 TMEM176BQ3YBM2 270 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-205ENST00000564899 FAM69AQ5T7M9 428 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 SLC6A19Q695T7 634 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 RPL13AP3Q6NVV1 102 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 Q6ZPB1 254 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-205ENST00000564899 NANOGNBQ7Z5D8 188 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 LRRC17Q8N6Y2 441 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 CLDN22Q8N7P3 220 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 OR51A7Q8NH64 312 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 LIPHQ8WWY8 451 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 OSTF1Q92882 214 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 SLC25A36Q96CQ1 311 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 ARL5BQ96KC2 179 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 ZNF570Q96NI8 536 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 MOGAT1Q96PD6 335 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 OR5B2Q96R09 309 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 TAPBPLQ9BX59 468 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 PLA2G12AQ9BZM1 189 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 SLC6A15Q9H2J7 730 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 OR52D1Q9H346 318 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 FKRPQ9H9S5 495 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 NANSQ9NR45 359 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 ZNF229Q9UJW7 825 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 SIGLEC7Q9Y286 467 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 GMPPBQ9Y5P6 360 aa9.97□□□□□ -0.81
SF3B3-205ENST00000564899 ZAR1LA6NP61 321 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 FTCDNL1E5RQL4 147 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 LINC01387J3KSC0 135 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 SLC16A6O15403 523 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 CLIC3O95833 236 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 HIST1H2ABP04908 130 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 ASAH2BP0C7U1 165 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 IMPDH2P12268 514 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 ACADSP16219 412 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 BMP7P18075 431 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 SHC1P29353 583 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 GRPRP30550 384 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 GFRA1P56159 465 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 RPS4XP62701 263 aaKnown RBP9.96□□□□□ -0.82
SF3B3-205ENST00000564899 RAC1P63000 192 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 MYBPHQ13203 477 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 KEAP1Q14145 624 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 SLC10A1Q14973 349 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 MFSD13AQ14CX5 517 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 PTGES3Q15185 160 aaKnown RBP9.96□□□□□ -0.82
SF3B3-205ENST00000564899 OR7A5Q15622 319 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 ZBED5Q49AG3 693 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 GXYLT1Q4G148 440 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 RNFT1Q5M7Z0 435 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 CLEC12AQ5QGZ9 265 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 SMARCD3Q6STE5 483 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 HIST3H2AQ7L7L0 130 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 CHERPQ8IWX8 916 aaKnown RBP9.96□□□□□ -0.82
SF3B3-205ENST00000564899 IQCF1Q8N6M8 205 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 OR52L1Q8NGH7 329 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 OR8D4Q8NGM9 314 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 MFSD8Q8NHS3 518 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 PRR7Q8TB68 274 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 HIST1H2ACQ93077 130 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 SAMD8Q96LT4 415 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 CNBD2Q96M20 576 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 KLHL15Q96M94 604 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 TNFRSF13CQ96RJ3 184 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 PITX2Q99697 317 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 TSSK6Q9BXA6 273 aa9.96□□□□□ -0.82
SF3B3-205ENST00000564899 ASPNQ9BXN1 380 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms