RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 SERPINB7O75635 380 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 MFN2O95140 757 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 PTNP21246 168 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 GTF2E2P29084 291 aaKnown RBP17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 SELENOPP49908 381 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 CDH11P55287 796 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 PCBP3P57721 371 aaKnown RBP17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 RPS4XP62701 263 aaKnown RBP17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 SLC25A3Q00325 362 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 SPOCK1Q08629 439 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 ALG10BQ5I7T1 473 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 METTL21CQ5VZV1 264 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 OR7E24Q6IFN5 339 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 CGB2Q6NT52 195 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 PRSS57Q6UWY2 283 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 CREB3L2Q70SY1 520 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 SSX8Q7RTT4 187 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 EPHX4Q8IUS5 362 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 WDR31Q8NA23 367 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 MUS81Q96NY9 551 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 C1QTNF6Q9BXI9 259 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 PIF1Q9H611 641 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 ZNF701Q9NV72 531 aaPredicted RBP17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 SLC13A4Q9UKG4 626 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 RASD1Q9Y272 281 aa17.54■□□□□ 0.4
SHCBP1-203ENST00000564272 TRIM64A6NGJ6 449 aa17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 TRIM64BA6NI03 449 aa17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 M0R3H8 397 aa17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 TPST2O60704 377 aa17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 VAMP5O95183 116 aa17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 INHBBP09529 407 aa17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 DANCRP0C864 163 aa17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 TROVE2P10155 538 aaKnown RBP eCLIP17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 PAX1P15863 534 aa17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 CDH2P19022 906 aaPredicted RBP17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 MPGP29372 298 aa17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 OR1Q1Q15612 314 aa17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 NET1Q7Z628 596 aaPredicted RBP17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 CIARTQ8N365 385 aaPredicted RBP17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 KDM8Q8N371 416 aa17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 C1orf162Q8NEQ5 155 aaPredicted RBP17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 RNF217Q8TC41 542 aa17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 SMAP2Q8WU79 429 aaPredicted RBP17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 DNAJA4Q8WW22 397 aaPredicted RBP17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 SLC38A4Q969I6 547 aa17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 TAAR8Q969N4 342 aa17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 KAT8Q9H7Z6 458 aaKnown RBP17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 SLC17A5Q9NRA2 495 aa17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 MAGED1Q9Y5V3 778 aaPredicted RBP17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 ZFHX3Q15911 3703 aa17.53■□□□□ 0.4
SHCBP1-203ENST00000564272 A0A0B4J2E0 115 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 A0A1B0GX12 115 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 H7C1Q1 480 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 M0R082 166 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 M0R1B8 84 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 TMCC2O75069 709 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 FZD7O75084 574 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 CBLP22681 906 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 ATP5J2P56134 94 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 RBBP4Q09028 425 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 PGGHGQ32M88 737 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 NIPAL3Q6P499 406 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 ULK3Q6PHR2 472 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 TMEM108Q6UXF1 575 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 PIAS4Q8N2W9 510 aaPredicted RBP17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 POMGNT2Q8NAT1 580 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 BHLHE22Q8NFJ8 381 aaPredicted RBP17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 GPR32P1Q8NGA4 272 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 OR10A6Q8NH74 314 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 ZNF417Q8TAU3 575 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 ALKBH3Q96Q83 286 aaPredicted RBP17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 ZNF587Q96SQ5 575 aaPredicted RBP17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 TMEM27Q9HBJ8 222 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 KLHL14Q9P2G3 628 aa17.52■□□□□ 0.4
SHCBP1-203ENST00000564272 TRAV36DV7A0A075B6V5 113 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 M0QX08 132 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 KRT33AO76009 404 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 VIMP08670 466 aaKnown RBP17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 CD40P25942 277 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 GRPRP30550 384 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 CDKN1AP38936 164 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 ARFIP2P53365 341 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 GUCY1A3Q02108 690 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 TGFBR3Q03167 851 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 TRMT5Q32P41 509 aaKnown RBP17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 HIKESHIQ53FT3 197 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 FAM69AQ5T7M9 428 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 FAM91A1Q658Y4 838 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 KLHL17Q6TDP4 642 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 Q71RC1 249 aaPredicted RBP17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 LINGO2Q7L985 606 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 BIVMQ86UB2 503 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 RANBP3LQ86VV4 465 aaPredicted RBP17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 C17orf78Q8N4C9 275 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 SLC47A1Q96FL8 570 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 COX4I2Q96KJ9 171 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 ARHGDIGQ99819 225 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 CISD1Q9NZ45 108 aaKnown RBP17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 SELENONQ9NZV5 590 aa17.51■□□□□ 0.39
SHCBP1-203ENST00000564272 B3GAT1Q9P2W7 334 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms