RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 MED31Q9Y3C7 131 aa14.86□□□□□ -0.03
RNF40-206ENST00000564260 FAM90A27PA6NNH2 459 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 EEF1E1-BLOC1S5C9J1V9 151 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 ACOT8O14734 319 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 EEF1E1O43324 174 aaKnown RBP14.85□□□□□ -0.03
RNF40-206ENST00000564260 BGLAPP02818 100 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 FABP3P05413 133 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 MAGEA2P43356 314 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 P2RY4P51582 365 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 ZNF74Q16587 644 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 C1QTNF12Q5T7M4 302 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 TMEM225Q6GV28 225 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 WDR88Q6ZMY6 472 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 CCDC121Q6ZUS5 278 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 SSX8Q7RTT4 187 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 BTLAQ7Z6A9 289 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 TSPYL5Q86VY4 417 aaPredicted RBP14.85□□□□□ -0.03
RNF40-206ENST00000564260 TUSC5Q8IXB3 177 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 ACOT11Q8WXI4 607 aaPredicted RBP14.85□□□□□ -0.03
RNF40-206ENST00000564260 DHRS1Q96LJ7 313 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 DOCK7Q96N67 2140 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 ENKD1Q9H0I2 346 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 NMNAT1Q9HAN9 279 aaPredicted RBP14.85□□□□□ -0.03
RNF40-206ENST00000564260 KRCC1Q9NPI7 259 aaPredicted RBP14.85□□□□□ -0.03
RNF40-206ENST00000564260 NANSQ9NR45 359 aa14.85□□□□□ -0.03
RNF40-206ENST00000564260 IGHV3-15A0A0B4J1V0 119 aa14.84□□□□□ -0.03
RNF40-206ENST00000564260 AKAP8O43823 692 aaKnown RBP14.84□□□□□ -0.03
RNF40-206ENST00000564260 KRT36O76013 467 aa14.84□□□□□ -0.03
RNF40-206ENST00000564260 PDE5AO76074 875 aa14.84□□□□□ -0.03
RNF40-206ENST00000564260 AKR7A3O95154 331 aa14.84□□□□□ -0.03
RNF40-206ENST00000564260 GOSR1O95249 250 aa14.84□□□□□ -0.03
RNF40-206ENST00000564260 MSX2P35548 267 aaPredicted RBP14.84□□□□□ -0.03
RNF40-206ENST00000564260 OR3A2P47893 321 aa14.84□□□□□ -0.03
RNF40-206ENST00000564260 P2RY6Q15077 328 aa14.84□□□□□ -0.03
RNF40-206ENST00000564260 CDSNQ15517 529 aa14.84□□□□□ -0.03
RNF40-206ENST00000564260 FAM98BQ52LJ0 330 aaKnown RBP14.84□□□□□ -0.03
RNF40-206ENST00000564260 VWA1Q6PCB0 445 aa14.84□□□□□ -0.03
RNF40-206ENST00000564260 TMEM99Q8N816 258 aa14.84□□□□□ -0.03
RNF40-206ENST00000564260 OR5J2Q8NH18 312 aa14.84□□□□□ -0.03
RNF40-206ENST00000564260 CCDC124Q96CT7 223 aaKnown RBP14.84□□□□□ -0.03
RNF40-206ENST00000564260 OXGR1Q96P68 337 aa14.84□□□□□ -0.03
RNF40-206ENST00000564260 PIP5K1AQ99755 562 aa14.84□□□□□ -0.03
RNF40-206ENST00000564260 RBM24Q9BX46 236 aaKnown RBP14.84□□□□□ -0.03
RNF40-206ENST00000564260 UCK2Q9BZX2 261 aa14.84□□□□□ -0.03
RNF40-206ENST00000564260 C6orf203Q9P0P8 240 aaPredicted RBP14.84□□□□□ -0.03
RNF40-206ENST00000564260 RCE1Q9Y256 329 aa14.84□□□□□ -0.03
RNF40-206ENST00000564260 TMEM5Q9Y2B1 443 aa14.84□□□□□ -0.03
RNF40-206ENST00000564260 SPTBN1Q01082 2364 aaKnown RBP14.84□□□□□ -0.03
RNF40-206ENST00000564260 PTPN13Q12923 2485 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 TCRBV5S2A0A599 114 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 M0R082 166 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 FFAR1O14842 300 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 HIST1H2ABP04908 130 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 H1F0P07305 194 aaKnown RBP14.83□□□□□ -0.04
RNF40-206ENST00000564260 ATP6V1B2P21281 511 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 GRPRP30550 384 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 SIRPAP78324 504 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 VLDLRP98155 873 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 MS4A2Q01362 244 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 CHRNB3Q05901 458 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 PUDPQ08623 228 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 ZP4Q12836 540 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 IQCCQ4KMZ1 466 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 PLXDC2Q6UX71 529 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 TFAP2EQ6VUC0 442 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 HIST3H2AQ7L7L0 130 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 PXKQ7Z7A4 578 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 NKAIN4Q8IVV8 208 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 CDK20Q8IZL9 346 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 LINC00471Q8N535 108 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 OR9K2Q8NGE7 335 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 ZNF417Q8TAU3 575 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 HIST1H2ACQ93077 130 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 SLC25A36Q96CQ1 311 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 ZNF587Q96SQ5 575 aaPredicted RBP14.83□□□□□ -0.04
RNF40-206ENST00000564260 HDHD5Q9BXW7 423 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 CADM1Q9BY67 442 aaKnown RBP14.83□□□□□ -0.04
RNF40-206ENST00000564260 MAN2C1Q9NTJ4 1040 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 NOSIPQ9Y314 301 aaKnown RBP14.83□□□□□ -0.04
RNF40-206ENST00000564260 NOX1Q9Y5S8 564 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 FLVCR1Q9Y5Y0 555 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 ADGRG4Q8IZF6 3080 aa14.83□□□□□ -0.04
RNF40-206ENST00000564260 PCNX1Q96RV3 2341 aa14.82□□□□□ -0.04
RNF40-206ENST00000564260 NKX2-6A6NCS4 301 aa14.82□□□□□ -0.04
RNF40-206ENST00000564260 MRPL33O75394 65 aaKnown RBP14.82□□□□□ -0.04
RNF40-206ENST00000564260 SMNDC1O75940 238 aaKnown RBP eCLIP14.82□□□□□ -0.04
RNF40-206ENST00000564260 ASAH2BP0C7U1 165 aa14.82□□□□□ -0.04
RNF40-206ENST00000564260 RAP2AP10114 183 aa14.82□□□□□ -0.04
RNF40-206ENST00000564260 PPP3CBP16298 524 aa14.82□□□□□ -0.04
RNF40-206ENST00000564260 ZNF43P17038 809 aa14.82□□□□□ -0.04
RNF40-206ENST00000564260 CD79BP40259 229 aa14.82□□□□□ -0.04
RNF40-206ENST00000564260 SLC9A3P48764 834 aa14.82□□□□□ -0.04
RNF40-206ENST00000564260 FLOT2Q14254 428 aa14.82□□□□□ -0.04
RNF40-206ENST00000564260 CYP2R1Q6VVX0 501 aa14.82□□□□□ -0.04
RNF40-206ENST00000564260 Q6ZT83 130 aa14.82□□□□□ -0.04
RNF40-206ENST00000564260 MBOAT2Q6ZWT7 520 aa14.82□□□□□ -0.04
RNF40-206ENST00000564260 RRM2BQ7LG56 351 aa14.82□□□□□ -0.04
RNF40-206ENST00000564260 TSEN54Q7Z6J9 526 aaKnown RBP14.82□□□□□ -0.04
RNF40-206ENST00000564260 YTHDF3Q7Z739 585 aaKnown RBP14.82□□□□□ -0.04
RNF40-206ENST00000564260 ZDHHC21Q8IVQ6 265 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms