RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 IGSF10Q6WRI0 2623 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 FAM208BQ5VWN6 2430 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 SCN2AQ99250 2005 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 IGHV1OR21-1A0A087WYE8 117 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 MAGEB16A2A368 324 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 CCDC162PA2VCL2 907 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 OR2AG2A6NM03 316 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 OR5K4A6NMS3 321 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 E2F3O00716 465 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 ZNF195O14628 629 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 DNALI1O14645 258 aaPredicted RBP4.11□□□□□ -1.75
LINC00254-201ENST00000563416 B4GAT1O43505 415 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 CSO75390 466 aaKnown RBP4.11□□□□□ -1.75
LINC00254-201ENST00000563416 SCGB2A1O75556 95 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 SNX4O95219 450 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 GOT2P00505 430 aaKnown RBP4.11□□□□□ -1.75
LINC00254-201ENST00000563416 PROS1P07225 676 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 SLC2A2P11168 524 aaPredicted RBP4.11□□□□□ -1.75
LINC00254-201ENST00000563416 RALBP11234 206 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 ATP1B2P14415 290 aaPredicted RBP4.11□□□□□ -1.75
LINC00254-201ENST00000563416 XRCC1P18887 633 aaPredicted RBP4.11□□□□□ -1.75
LINC00254-201ENST00000563416 IVDP26440 423 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 SOX6P35712 828 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 NPY2RP49146 381 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 GBX2P52951 348 aaPredicted RBP4.11□□□□□ -1.75
LINC00254-201ENST00000563416 CLDN6P56747 220 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 CCL7P80098 99 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 TRIP13Q15645 432 aaPredicted RBP4.11□□□□□ -1.75
LINC00254-201ENST00000563416 KCTD19Q17RG1 926 aaPredicted RBP4.11□□□□□ -1.75
LINC00254-201ENST00000563416 ISXQ2M1V0 245 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 PRAMEF7Q5VXH5 474 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 ZNF770Q6IQ21 691 aaPredicted RBP4.11□□□□□ -1.75
LINC00254-201ENST00000563416 LRRTM1Q86UE6 522 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 AMZ2Q86W34 360 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 SERPINA9Q86WD7 417 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 MARCH9Q86YJ5 346 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 TRAPPC5Q8IUR0 188 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 PIANPQ8IYJ0 282 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 RNF148Q8N7C7 305 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 DNAAF3Q8N9W5 541 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 OR2L2Q8NH16 312 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 MAPK15Q8TD08 544 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 SMAP2Q8WU79 429 aaPredicted RBP4.11□□□□□ -1.75
LINC00254-201ENST00000563416 FAM46BQ96A09 425 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 NXPE2Q96DL1 559 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 CAPZA3Q96KX2 299 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 SERPINB12Q96P63 405 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 ATOH8Q96SQ7 321 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 COPS8Q99627 209 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 NKX3-1Q99801 234 aaPredicted RBP4.11□□□□□ -1.75
LINC00254-201ENST00000563416 CABLES2Q9BTV7 478 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 KIFC1Q9BW19 673 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 TPPP3Q9BW30 176 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 CARD6Q9BX69 1037 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 LRRN3Q9H3W5 708 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 UCK1Q9HA47 277 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 CHRAC1Q9NRG0 131 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 SLC2A6Q9UGQ3 507 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 SH3GLB1Q9Y371 365 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 DOCK10Q96BY6 2186 aa4.11□□□□□ -1.75
LINC00254-201ENST00000563416 MN1Q10571 1320 aaPredicted RBP4.11□□□□□ -1.75
LINC00254-201ENST00000563416 A0A1W2PNU3 283 aaPredicted RBP4.1□□□□□ -1.75
LINC00254-201ENST00000563416 FAM230AA0A1W2PPH8 454 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 TRABD2BA6NFA1 517 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 MGAT4DA6NG13 374 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 OR51F1A6NGY5 319 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 C15orf61A6NNL5 157 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 KRTAP16-1A8MUX0 517 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 TMX2-CTNND1H3BSU7 103 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 ZW10O43264 779 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 GMFGO60234 142 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 POP7O75817 140 aaKnown RBP4.1□□□□□ -1.75
LINC00254-201ENST00000563416 CPNE6O95741 557 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 CLDN1O95832 211 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 RPLP0P05388 317 aaKnown RBP4.1□□□□□ -1.75
LINC00254-201ENST00000563416 PRKAR1AP10644 381 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 THRAP10827 490 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 THRBP10828 461 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 IDSP22304 550 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 CD1CP29017 333 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 NSG1P42857 185 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 LEPRP48357 1165 aaKnown RBP4.1□□□□□ -1.75
LINC00254-201ENST00000563416 TRPC1P48995 793 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 MTTPP55157 894 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 OR1D5P58170 312 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 KRTAP10-12P60413 245 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 RPP38P78345 283 aaKnown RBP4.1□□□□□ -1.75
LINC00254-201ENST00000563416 CRADDP78560 199 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 SARNPP82979 210 aaKnown RBP4.1□□□□□ -1.75
LINC00254-201ENST00000563416 ZFP36L1Q07352 338 aaKnown RBP4.1□□□□□ -1.75
LINC00254-201ENST00000563416 EIF3IQ13347 325 aaKnown RBP4.1□□□□□ -1.75
LINC00254-201ENST00000563416 PPP1R7Q15435 360 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 LYPLAL1Q5VWZ2 237 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 OR4A47Q6IF82 309 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 UGT3A1Q6NUS8 523 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 SLC25A47Q6Q0C1 308 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 TMEM220Q6QAJ8 160 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 SYT10Q6XYQ8 523 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 SIGLEC15Q6ZMC9 328 aa4.1□□□□□ -1.75
LINC00254-201ENST00000563416 CERS6Q6ZMG9 384 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms