RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 HIST3H2AQ7L7L0 130 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 SHFQ7M4L6 423 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 NANOGNBQ7Z5D8 188 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 ATP6V1C2Q8NEY4 427 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 OR5M1Q8NGP8 315 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 C9orf43Q8TAL5 461 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-208ENST00000563220 HIST1H2ACQ93077 130 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 ARL5BQ96KC2 179 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 GNRHR2Q96P88 292 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 IP6K3Q96PC2 410 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 TAS2R5Q9NYW4 299 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 WARS2Q9UGM6 360 aaKnown RBP16.31■□□□□ 0.2
COMMD4-208ENST00000563220 DIMT1Q9UNQ2 313 aaKnown RBP16.31■□□□□ 0.2
COMMD4-208ENST00000563220 M0R082 166 aa16.3■□□□□ 0.2
COMMD4-208ENST00000563220 SNPHO15079 494 aa16.3■□□□□ 0.2
COMMD4-208ENST00000563220 ATE1O95260 518 aa16.3■□□□□ 0.2
COMMD4-208ENST00000563220 MT-ATP6P00846 226 aa16.3■□□□□ 0.2
COMMD4-208ENST00000563220 CLUP10909 449 aa16.3■□□□□ 0.2
COMMD4-208ENST00000563220 ZNF3P17036 446 aa16.3■□□□□ 0.2
COMMD4-208ENST00000563220 CTXN1P60606 82 aa16.3■□□□□ 0.2
COMMD4-208ENST00000563220 ANKDD1AQ495B1 522 aa16.3■□□□□ 0.2
COMMD4-208ENST00000563220 PAQR6Q6TCH4 344 aa16.3■□□□□ 0.2
COMMD4-208ENST00000563220 MEPCEQ7L2J0 689 aaKnown RBP16.3■□□□□ 0.2
COMMD4-208ENST00000563220 MAMDC2Q7Z304 686 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-208ENST00000563220 SDR9C7Q8NEX9 313 aa16.3■□□□□ 0.2
COMMD4-208ENST00000563220 FCGR1BQ92637 280 aa16.3■□□□□ 0.2
COMMD4-208ENST00000563220 CRELD1Q96HD1 420 aa16.3■□□□□ 0.2
COMMD4-208ENST00000563220 OR5M11Q96RB7 305 aa16.3■□□□□ 0.2
COMMD4-208ENST00000563220 DDOQ99489 341 aa16.3■□□□□ 0.2
COMMD4-208ENST00000563220 FUNDC2Q9BWH2 189 aa16.3■□□□□ 0.2
COMMD4-208ENST00000563220 PTGES2Q9H7Z7 377 aa16.3■□□□□ 0.2
COMMD4-208ENST00000563220 FGF20Q9NP95 211 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-208ENST00000563220 WDR70Q9NW82 654 aa16.3■□□□□ 0.2
COMMD4-208ENST00000563220 FTCDNL1E5RQL4 147 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 IMPA2O14732 288 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 ZNF208O43345 1280 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 AHSA1O95433 338 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 RAB36O95755 333 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 IFNGP01579 166 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 CD14P08571 375 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 GRPRP30550 384 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.29■□□□□ 0.2
COMMD4-208ENST00000563220 SRSF6Q13247 344 aaKnown RBP16.29■□□□□ 0.2
COMMD4-208ENST00000563220 RNLSQ5VYX0 342 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 SLC6A19Q695T7 634 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 C5orf46Q6UWT4 87 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 FAM122BQ7Z309 247 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 GID4Q8IVV7 300 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 OR4F15Q8NGB8 312 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 KIAA1143Q96AT1 154 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-208ENST00000563220 RASD2Q96D21 266 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 YIPF6Q96EC8 236 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 Q96M85 177 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 OR51V1Q9H2C8 321 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 PLGRKTQ9HBL7 147 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 FAM186AA6NE01 2351 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 A0A0G2JMM0 328 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 A0A1W2PPB8 328 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 A0A1W2PRS3 328 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 CCDC182A6NF36 153 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 KIR3DP1A8MWS1 328 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 SLC30A4O14863 429 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 IDH3BO43837 385 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 OR2T1O43869 369 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 NOL3O60936 208 aaKnown RBP16.29■□□□□ 0.2
COMMD4-208ENST00000563220 F10P00742 488 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 ITGA3P26006 1051 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 AIMP2Q13155 320 aaKnown RBP16.29■□□□□ 0.2
COMMD4-208ENST00000563220 KLHL12Q53G59 568 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 VASH2Q86V25 355 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 FAM98AQ8NCA5 519 aaKnown RBP16.29■□□□□ 0.2
COMMD4-208ENST00000563220 NPEPL1Q8NDH3 523 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 OR1J4Q8NGS1 313 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 OR5J2Q8NH18 312 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 KISS1RQ969F8 398 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-208ENST00000563220 JSRP1Q96MG2 331 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-208ENST00000563220 KLHL21Q9UJP4 597 aa16.29■□□□□ 0.2
COMMD4-208ENST00000563220 EXOGQ9Y2C4 368 aaKnown RBP16.29■□□□□ 0.2
COMMD4-208ENST00000563220 TEX13CA0A0J9YWL9 993 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 H3BML4 177 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 DXOO77932 396 aaKnown RBP16.28■□□□□ 0.2
COMMD4-208ENST00000563220 SNX4O95219 450 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 LIPCP11150 499 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 SLC2A5P22732 501 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 LIPAP38571 399 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 DNASE1L1P49184 302 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 CYB561P49447 251 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 ETV1P50549 477 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 CAMK2BQ13554 666 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 SGCBQ16585 318 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 TIGD6Q17RP2 521 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 TIGD3Q6B0B8 471 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 NANOGP1Q8N7R0 232 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 OR6S1Q8NH40 331 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 ZPLD1Q8TCW7 415 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 DDIT4LQ96D03 193 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 TMEM41AQ96HV5 264 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 FER1L6-AS2Q96M78 137 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 NMNAT3Q96T66 252 aa16.28■□□□□ 0.2
COMMD4-208ENST00000563220 TEAD3Q99594 435 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms