RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 MCTS1Q9ULC4 181 aaKnown RBP13.95□□□□□ -0.18
USB1-208ENST00000563207 TMEM72A0PK05 275 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 PDE5AO76074 875 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 PRKD3O94806 890 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 SYNGR4O95473 234 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 PMS2P2O95744 297 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 TFPIP10646 304 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 FCGR2AP12318 317 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 ITGA2P17301 1181 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 HOXB6P17509 224 aaKnown RBP13.94□□□□□ -0.18
USB1-208ENST00000563207 SHC1P29353 583 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 UGT2B10P36537 528 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 OR1E2P47887 323 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 TAS2R41P59536 307 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 GTF2IRD2BQ6EKJ0 949 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 OR2A2Q6IF42 318 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 Q71RC1 249 aaPredicted RBP13.94□□□□□ -0.18
USB1-208ENST00000563207 GTF2IRD2Q86UP8 949 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 CXorf67Q86X51 503 aaPredicted RBP13.94□□□□□ -0.18
USB1-208ENST00000563207 RBM45Q8IUH3 476 aaKnown RBP13.94□□□□□ -0.18
USB1-208ENST00000563207 PIK3IP1Q96FE7 263 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 CLPTM1LQ96KA5 538 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 LRGUKQ96M69 825 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 OR5B2Q96R09 309 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 TMEM43Q9BTV4 400 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 PRR14Q9BWN1 585 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 CADM1Q9BY67 442 aaKnown RBP13.94□□□□□ -0.18
USB1-208ENST00000563207 TRIM15Q9C019 465 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 AMBRA1Q9C0C7 1298 aa13.94□□□□□ -0.18
USB1-208ENST00000563207 CPSF4LA6NMK7 179 aaKnown RBP13.93□□□□□ -0.18
USB1-208ENST00000563207 SULT2B1O00204 365 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 CASKO14936 926 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 OR2T1O43869 369 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 EIF1BO60739 113 aaKnown RBP13.93□□□□□ -0.18
USB1-208ENST00000563207 NPIPB7O75200 414 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 CRHP06850 196 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 LOXP28300 417 aaPredicted RBP13.93□□□□□ -0.18
USB1-208ENST00000563207 HOXC12P31275 282 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 DIO1P49895 249 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 CDH12P55289 794 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 MS4A2Q01362 244 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 GABPB1Q06547 395 aaPredicted RBP13.93□□□□□ -0.18
USB1-208ENST00000563207 ST3GAL3Q11203 375 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 EXOC3L2Q2M3D2 409 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 LINC00114Q6XXX2 140 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 DEF8Q6ZN54 512 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 CYP4Z1Q86W10 505 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 SLC43A2Q8N370 569 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 CCDC124Q96CT7 223 aaKnown RBP13.93□□□□□ -0.18
USB1-208ENST00000563207 ZHX1-C8orf76Q96EF9 292 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 PRRC1Q96M27 445 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 EPYCQ99645 322 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 SLC19A3Q9BZV2 496 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 COQ10BQ9H8M1 238 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 GLRX2Q9NS18 164 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 NDRG3Q9UGV2 375 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 RIMS3Q9UJD0 308 aa13.93□□□□□ -0.18
USB1-208ENST00000563207 HTR3EA5X5Y0 456 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 AQP12BA6NM10 295 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 ACOT8O14734 319 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 CXCL13O43927 109 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 GPIP06744 558 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 THBDP07204 575 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 POU2F1P14859 743 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 CCNA2P20248 432 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 TNFRSF1BP20333 461 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 IDUAP35475 653 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 RBM34P42696 430 aaKnown RBP13.92□□□□□ -0.18
USB1-208ENST00000563207 SLC35A1P78382 337 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 C1orf140Q5VVS0 124 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 CYP2R1Q6VVX0 501 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 ASRGL1Q7L266 308 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 YTHDF3Q7Z739 585 aaKnown RBP13.92□□□□□ -0.18
USB1-208ENST00000563207 AQP12AQ8IXF9 295 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 OR6S1Q8NH40 331 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 RNF217Q8TC41 542 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 SLC41A3Q96GZ6 507 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 ARL5BQ96KC2 179 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 C7orf34Q96L11 122 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 HS6ST2Q96MM7 605 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 MED18Q9BUE0 208 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 PRRG4Q9BZD6 226 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 KLHL4Q9C0H6 718 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 OR11A1Q9GZK7 315 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 MAGIXQ9H6Y5 334 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 GP6Q9HCN6 339 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 FAM32AQ9Y421 112 aaKnown RBP13.92□□□□□ -0.18
USB1-208ENST00000563207 ENPP4Q9Y6X5 453 aa13.92□□□□□ -0.18
USB1-208ENST00000563207 RAI1Q7Z5J4 1906 aaPredicted RBP13.92□□□□□ -0.18
USB1-208ENST00000563207 A0A1W2PNR3 127 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 AHSA1O95433 338 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 IGF2P01344 180 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 SEMG1P04279 462 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 CD8BP10966 210 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 UMPSP11172 480 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 RHCEP18577 417 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 ATP6V1B2P21281 511 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 ENPP1P22413 925 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 PIN1Q13526 163 aaPredicted RBP13.91□□□□□ -0.18
USB1-208ENST00000563207 MFSD13AQ14CX5 517 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms