RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 CRATP43155 626 aa11.31□□□□□ -0.6
SF3B3-202ENST00000562722 LRRC74AQ0VAA2 488 aa11.31□□□□□ -0.6
SF3B3-202ENST00000562722 STX3Q13277 289 aa11.31□□□□□ -0.6
SF3B3-202ENST00000562722 C1orf140Q5VVS0 124 aa11.31□□□□□ -0.6
SF3B3-202ENST00000562722 ZNF836Q6ZNA1 936 aa11.31□□□□□ -0.6
SF3B3-202ENST00000562722 LRRC34Q8IZ02 419 aa11.31□□□□□ -0.6
SF3B3-202ENST00000562722 ZNF540Q8NDQ6 660 aa11.31□□□□□ -0.6
SF3B3-202ENST00000562722 PRR14Q9BWN1 585 aa11.31□□□□□ -0.6
SF3B3-202ENST00000562722 RAB1BQ9H0U4 201 aa11.31□□□□□ -0.6
SF3B3-202ENST00000562722 PIF1Q9H611 641 aa11.31□□□□□ -0.6
SF3B3-202ENST00000562722 MEAF6Q9HAF1 191 aa11.31□□□□□ -0.6
SF3B3-202ENST00000562722 KCNK9Q9NPC2 374 aa11.31□□□□□ -0.6
SF3B3-202ENST00000562722 PNPOQ9NVS9 261 aa11.31□□□□□ -0.6
SF3B3-202ENST00000562722 AIG1Q9NVV5 245 aa11.31□□□□□ -0.6
SF3B3-202ENST00000562722 CDHR4A6H8M9 788 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 TMEM247A6NEH6 219 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 OR6C65A6NJZ3 312 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 VSTM5A8MXK1 200 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 RFXANKO14593 260 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 TM9SF1O15321 606 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 FRS3O43559 492 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 AHSA1O95433 338 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 ANP32DO95626 131 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 BCHEP06276 602 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 C8BP07358 591 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 ALDOCP09972 364 aaKnown RBP11.3□□□□□ -0.6
SF3B3-202ENST00000562722 CECR9P0C854 216 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 PAX7P23759 505 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 THBS2P35442 1172 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 NAAAQ02083 359 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 LARS2Q15031 903 aaKnown RBP11.3□□□□□ -0.6
SF3B3-202ENST00000562722 ADIPOQQ15848 244 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 ATG16L1Q676U5 607 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 ANKRD16Q6P6B7 361 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 CREB3L2Q70SY1 520 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 AENQ8WTP8 325 aaKnown RBP11.3□□□□□ -0.6
SF3B3-202ENST00000562722 SLC25A36Q96CQ1 311 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 BPESC1Q9GZL8 116 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 CALML5Q9NZT1 146 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 RASD1Q9Y272 281 aa11.3□□□□□ -0.6
SF3B3-202ENST00000562722 ZNF443Q9Y2A4 671 aaPredicted RBP11.3□□□□□ -0.6
SF3B3-202ENST00000562722 A0A096LPI6 279 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 UPK3AO75631 287 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 PDE5AO76074 875 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 TFPTP0C1Z6 253 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 ETFAP13804 333 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 ZNF23P17027 643 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 IL12AP29459 219 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 CAPZA2P47755 286 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 CRISP3P54108 245 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 DSTNP60981 165 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 IL1RL1Q01638 556 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 ROR2Q01974 943 aaKnown RBP11.29□□□□□ -0.6
SF3B3-202ENST00000562722 SQLEQ14534 574 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 RPS26P11Q5JNZ5 115 aaPredicted RBP11.29□□□□□ -0.6
SF3B3-202ENST00000562722 LIPNQ5VXI9 398 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 NXNQ6DKJ4 435 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 OGFOD2Q6N063 350 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 EPHX4Q8IUS5 362 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 OR4F15Q8NGB8 312 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 BCL2L2Q92843 193 aaPredicted RBP11.29□□□□□ -0.6
SF3B3-202ENST00000562722 ZBTB9Q96C00 473 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 TMEM109Q9BVC6 243 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 ARMC7Q9H6L4 198 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 MOV10Q9HCE1 1003 aaKnown RBP11.29□□□□□ -0.6
SF3B3-202ENST00000562722 DYNLRB1Q9NP97 96 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 ZNF232Q9UNY5 417 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 SVEP1Q4LDE5 3571 aa11.29□□□□□ -0.6
SF3B3-202ENST00000562722 ARPC4-TTLL3A0A0A6YYG9 625 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 LRP5LA4QPB2 252 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 hCG_2039718K7EN88 272 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 SDHDO14521 159 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 PRG2P13727 222 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 DAOP14920 347 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 ZNF43P17038 809 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 EPHA3P29320 983 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 CALCRP30988 508 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 ACAA2P42765 397 aaKnown RBP11.28□□□□□ -0.6
SF3B3-202ENST00000562722 RPS5P46782 204 aaKnown RBP11.28□□□□□ -0.6
SF3B3-202ENST00000562722 PPOXP50336 477 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 IDH3GP51553 393 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-202ENST00000562722 P2RY4P51582 365 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 SH3BGRP55822 239 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-202ENST00000562722 CLDN17P56750 224 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 ARF1P84077 181 aaKnown RBP11.28□□□□□ -0.6
SF3B3-202ENST00000562722 BST1Q10588 318 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 NPRL3Q12980 569 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 C1DQ13901 141 aaKnown RBP11.28□□□□□ -0.6
SF3B3-202ENST00000562722 EFNB3Q15768 340 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 ZSWIM7Q19AV6 140 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 CR1LQ2VPA4 569 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 RNF220Q5VTB9 566 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 LINGO2Q7L985 606 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 SPATA21Q7Z572 469 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 SERPINA11Q86U17 422 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 KDM8Q8N371 416 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 CLIP4Q8N3C7 705 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 SVOPLQ8N434 492 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 GLB1L3Q8NCI6 653 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-202ENST00000562722 BOD1Q96IK1 185 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms