RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 UGT2B15P54855 530 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 OR2B6P58173 313 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 TAS2R41P59536 307 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 SORDQ00796 357 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 RASGEF1BQ0VAM2 473 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 DGCR6Q14129 220 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 OR7A5Q15622 319 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 ZNF74Q16587 644 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 ZNF474Q6S9Z5 364 aaPredicted RBP11.93□□□□□ -0.5
CDH1-204ENST00000562118 TUSC5Q8IXB3 177 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 TMEM99Q8N816 258 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 ZIC4Q8N9L1 334 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 HS6ST2Q96MM7 605 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 MOGAT1Q96PD6 335 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 NAA11Q9BSU3 229 aaPredicted RBP11.93□□□□□ -0.5
CDH1-204ENST00000562118 FKRPQ9H9S5 495 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 CHST11Q9NPF2 352 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 KCNJ16Q9NPI9 418 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 MRPL39Q9NYK5 338 aaKnown RBP11.93□□□□□ -0.5
CDH1-204ENST00000562118 SELENONQ9NZV5 590 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 PLEKHB1Q9UF11 243 aaPredicted RBP11.93□□□□□ -0.5
CDH1-204ENST00000562118 EMC9Q9Y3B6 208 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 HRNRQ86YZ3 2850 aaPredicted RBP11.93□□□□□ -0.5
CDH1-204ENST00000562118 NKX2-6A6NCS4 301 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 AQP12BA6NM10 295 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 GPR171O14626 319 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 CNOT4O95628 575 aaKnown RBP11.92□□□□□ -0.5
CDH1-204ENST00000562118 MT-ND1P03886 318 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 CTBP2P56545 445 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 OTUD3Q5T2D3 398 aaPredicted RBP11.92□□□□□ -0.5
CDH1-204ENST00000562118 TTC33Q6PID6 262 aaPredicted RBP11.92□□□□□ -0.5
CDH1-204ENST00000562118 TFAP2EQ6VUC0 442 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 FKBP9P1Q75LS8 142 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 DHFR2Q86XF0 187 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 CCDC103Q8IW40 242 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 AQP12AQ8IXF9 295 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 TMEM255BQ8WV15 326 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 TMEM239Q8WW34 195 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 RNASE6Q93091 150 aaKnown RBP11.92□□□□□ -0.5
CDH1-204ENST00000562118 SPOCK3Q9BQ16 436 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 TAPBPLQ9BX59 468 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 PRRG4Q9BZD6 226 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 NMNAT1Q9HAN9 279 aaPredicted RBP11.92□□□□□ -0.5
CDH1-204ENST00000562118 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.92□□□□□ -0.5
CDH1-204ENST00000562118 SEC14L4Q9UDX3 406 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 SLC7A8Q9UHI5 535 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 ZNF229Q9UJW7 825 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 RASD1Q9Y272 281 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 FLVCR1Q9Y5Y0 555 aa11.92□□□□□ -0.5
CDH1-204ENST00000562118 TCRBV3S1A0A5B6 114 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 FAM90A27PA6NNH2 459 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 MS4A18H0YCH9 400 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 M0R082 166 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 AKR7A3O95154 331 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 ITGA2P17301 1181 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 HOXB6P17509 224 aaKnown RBP11.91□□□□□ -0.5
CDH1-204ENST00000562118 GRPRP30550 384 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 OR3A2P47893 321 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 LIMS1P48059 325 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 HMGA2P52926 109 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 RPS4XP62701 263 aaKnown RBP11.91□□□□□ -0.5
CDH1-204ENST00000562118 ZP4Q12836 540 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 FHL1Q13642 323 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 TRAM2Q15035 370 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 MS4A18Q3C1V0 323 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 CYP2R1Q6VVX0 501 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 H1FNTQ75WM6 255 aaPredicted RBP11.91□□□□□ -0.5
CDH1-204ENST00000562118 NUFIP2Q7Z417 695 aaKnown RBP11.91□□□□□ -0.5
CDH1-204ENST00000562118 P3H2Q8IVL5 708 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 DMRTC2Q8IXT2 367 aaPredicted RBP11.91□□□□□ -0.5
CDH1-204ENST00000562118 RNF113BQ8IZP6 322 aaKnown RBP11.91□□□□□ -0.5
CDH1-204ENST00000562118 GABRG1Q8N1C3 465 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 OR9K2Q8NGE7 335 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 ZNF417Q8TAU3 575 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 SLC7A13Q8TCU3 470 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 ACOT11Q8WXI4 607 aaPredicted RBP11.91□□□□□ -0.5
CDH1-204ENST00000562118 ZNF587Q96SQ5 575 aaPredicted RBP11.91□□□□□ -0.5
CDH1-204ENST00000562118 PIP5K1AQ99755 562 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 EMC3Q9P0I2 261 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 CLEC4AQ9UMR7 237 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 POMPQ9Y244 141 aa11.91□□□□□ -0.5
CDH1-204ENST00000562118 A0A087WUU8 490 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 PDLIM1O00151 329 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 PLPP3O14495 311 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 TRAF3IP2O43734 574 aaPredicted RBP11.9□□□□□ -0.5
CDH1-204ENST00000562118 ZNF432O94892 652 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 EDNRAP25101 427 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 CCKARP32238 428 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 PEX19P40855 299 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 CBX1P83916 185 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 PRKCDQ05655 676 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 MBOAT2Q6ZWT7 520 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 CREB3L2Q70SY1 520 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 EPHX4Q8IUS5 362 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 MCEMP1Q8IX19 187 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 ADGRG5Q8IZF4 528 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 CNEP1R1Q8N9A8 125 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 PAPD5Q8NDF8 572 aaKnown RBP11.9□□□□□ -0.5
CDH1-204ENST00000562118 PFN4Q8NHR9 129 aa11.9□□□□□ -0.5
CDH1-204ENST00000562118 CCDC124Q96CT7 223 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms