RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 SSX6Q7RTT6 188 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 ARL14Q8N4G2 192 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 BMPERQ8N8U9 685 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 OR4K13Q8NH42 304 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 RSC1A1Q92681 617 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 PMM1Q92871 262 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 NXPE2Q96DL1 559 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 TRIM2Q9C040 744 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 POLE3Q9NRF9 147 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 ENTPD2Q9Y5L3 495 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 MAGEB4O15481 346 aaPredicted RBP10.08□□□□□ -0.8
NEIL1-202ENST00000561643 ADAM11O75078 769 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 RAB3BP20337 219 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 SLC6A1P30531 599 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 NRG3P56975 720 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 POU4F2Q12837 409 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 RNASE12Q5GAN4 147 aaKnown RBP10.08□□□□□ -0.8
NEIL1-202ENST00000561643 FTMTQ8N4E7 242 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 RFLNBQ8N5W9 214 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 OR4N2Q8NGD1 307 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 ANKRD9Q96BM1 317 aaPredicted RBP10.08□□□□□ -0.8
NEIL1-202ENST00000561643 CTHRC1Q96CG8 243 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 PGLYRP3Q96LB9 341 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 NPAS1Q99742 590 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 ACTR6Q9GZN1 396 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 OR51J1Q9H342 316 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 RPS6KB2Q9UBS0 482 aa10.08□□□□□ -0.8
NEIL1-202ENST00000561643 FZD7O75084 574 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 NGFRP08138 427 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 TFPIP10646 304 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 RAB3AP20336 220 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 CTHP32929 405 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 NAA10P41227 235 aaPredicted RBP10.07□□□□□ -0.8
NEIL1-202ENST00000561643 PPP1CAP62136 330 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 CAMK2DQ13557 499 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 ZNF542PQ5EBM4 170 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 DMKNQ6E0U4 476 aaPredicted RBP10.07□□□□□ -0.8
NEIL1-202ENST00000561643 Q6ZSR6 202 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 RNF44Q7L0R7 432 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 OOSP2Q86WS3 158 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 CCDC36Q8IYA8 594 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 OR9A4Q8NGU2 314 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 SLC2A12Q8TD20 617 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 ABHD1Q96SE0 405 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 CDCA3Q99618 268 aaPredicted RBP10.07□□□□□ -0.8
NEIL1-202ENST00000561643 TTYH1Q9H313 450 aaPredicted RBP10.07□□□□□ -0.8
NEIL1-202ENST00000561643 ZCCHC4Q9H5U6 513 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 LDAHQ9H6V9 325 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 CACNG2Q9Y698 323 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 SESN1Q9Y6P5 492 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 A0A0G2JK05 382 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 MFSD2BA6NFX1 497 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 SLC35E2P0CK97 266 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 POU3F2P20265 443 aaPredicted RBP10.07□□□□□ -0.8
NEIL1-202ENST00000561643 AKT2P31751 481 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 SRP9P49458 86 aaKnown RBP10.07□□□□□ -0.8
NEIL1-202ENST00000561643 RAB38P57729 211 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 PSG6Q00889 435 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 ZNF169Q14929 603 aaPredicted RBP10.07□□□□□ -0.8
NEIL1-202ENST00000561643 NTRK2Q16620 822 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 PYHIN1Q6K0P9 492 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 PXKQ7Z7A4 578 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 SLC6A15Q9H2J7 730 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 POT1Q9NUX5 634 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 DNAJB12Q9NXW2 375 aaKnown RBP10.07□□□□□ -0.8
NEIL1-202ENST00000561643 HAO2Q9NYQ3 351 aa10.07□□□□□ -0.8
NEIL1-202ENST00000561643 XIRP2A4UGR9 3374 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 HIST1H1CP16403 213 aaKnown RBP10.06□□□□□ -0.8
NEIL1-202ENST00000561643 TYRP1P17643 537 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 AHCYP23526 432 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 RPL4P36578 427 aaKnown RBP10.06□□□□□ -0.8
NEIL1-202ENST00000561643 RBM34P42696 430 aaKnown RBP10.06□□□□□ -0.8
NEIL1-202ENST00000561643 ACAA2P42765 397 aaKnown RBP10.06□□□□□ -0.8
NEIL1-202ENST00000561643 BTG1P62324 171 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 ETFDHQ16134 617 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 PLA1AQ53H76 456 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 MANEAQ5SRI9 462 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 SYT9Q86SS6 491 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 SNX33Q8WV41 574 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 ATOH1Q92858 354 aaPredicted RBP10.06□□□□□ -0.8
NEIL1-202ENST00000561643 INTS12Q96CB8 462 aaKnown RBP10.06□□□□□ -0.8
NEIL1-202ENST00000561643 ZFP3Q96NJ6 502 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 TCEAL2Q9H3H9 227 aaPredicted RBP10.06□□□□□ -0.8
NEIL1-202ENST00000561643 EMC3Q9P0I2 261 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 IER3IP1Q9Y5U9 82 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 KNL1Q8NG31 2342 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 HCRTR1O43613 425 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 CDC123O75794 336 aaPredicted RBP10.06□□□□□ -0.8
NEIL1-202ENST00000561643 SC5DO75845 299 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 SERPINA3P01011 423 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 SELLP14151 372 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 SRSF5Q13243 272 aaKnown RBP10.06□□□□□ -0.8
NEIL1-202ENST00000561643 NNATQ16517 81 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 HSD17B12Q53GQ0 312 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 OR2T35Q8NGX2 323 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 OR2T4Q8NH00 348 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 COQ8AQ8NI60 647 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 SLC37A2Q8TED4 501 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 THAP4Q8WY91 577 aa10.06□□□□□ -0.8
NEIL1-202ENST00000561643 RBM18Q96H35 190 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms