RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 MOB3AQ96BX8 217 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 CCDC124Q96CT7 223 aaKnown RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 OTUB1Q96FW1 271 aaPredicted RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 DUS3LQ96G46 650 aaKnown RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 CCNL2Q96S94 520 aaPredicted RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 CCT8L2Q96SF2 557 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 P2RY13Q9BPV8 354 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 ZNF559Q9BR84 538 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 TUBGCP2Q9BSJ2 902 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 UBXN6Q9BZV1 441 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 ROPN1BQ9BZX4 212 aaPredicted RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 VN1R1Q9GZP7 353 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 C6orf62Q9GZU0 229 aaPredicted RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 OPN3Q9H1Y3 402 aaPredicted RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 GOLPH3Q9H4A6 298 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 CALHM2Q9HA72 323 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 MYNNQ9NPC7 610 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 C20orf96Q9NUD7 363 aaPredicted RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 CLEC5AQ9NY25 188 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 PLEK2Q9NYT0 353 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 AHSPQ9NZD4 102 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 MTCH1Q9NZJ7 389 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 PAIP2BQ9ULR5 123 aaKnown RBP3.61□□□□□ -1.83
LRRC28-222ENST00000561431 RASD1Q9Y272 281 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 LRRC42Q9Y546 428 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 CACNA1HO95180 2353 aa3.61□□□□□ -1.83
LRRC28-222ENST00000561431 A0A087X0K7 114 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 A0A1B0GUV1 79 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 A0A1W2PPQ1 181 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 TMEM129A0AVI4 362 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 FAM172BPA6NC97 362 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 GOLGA6L10A6NI86 522 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 ARGFXA6NJG6 315 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 YJEFN3A6XGL0 299 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 NPIPA2E9PIF3 369 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 PPIAL4DF5H284 164 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 K7EQS6 105 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 PGRMC1O00264 195 aaKnown RBP3.6□□□□□ -1.83
LRRC28-222ENST00000561431 TOR1AO14656 332 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 SLC9A3R1O14745 358 aaPredicted RBP3.6□□□□□ -1.83
LRRC28-222ENST00000561431 BCKDKO14874 412 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 FLRT2O43155 660 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 OR2F2O95006 317 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 C9P02748 559 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 FTH1P02794 183 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 FCER2P06734 321 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 STSP08842 583 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 RAB4AP20338 218 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 GSTM3P21266 225 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 CNR1P21554 472 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 ALDH3A1P30838 453 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 CDX1P47902 265 aaPredicted RBP3.6□□□□□ -1.83
LRRC28-222ENST00000561431 CSNK1DP48730 415 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 RPL34P49207 117 aaKnown RBP3.6□□□□□ -1.83
LRRC28-222ENST00000561431 TGM4P49221 684 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 CDC34P49427 236 aaPredicted RBP3.6□□□□□ -1.83
LRRC28-222ENST00000561431 SERPINB9P50453 376 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 NDST2P52849 883 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 PLK1P53350 603 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 SEC61GP60059 68 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 FGL1Q08830 312 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 ARL16Q0P5N6 197 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 ADIGQ0VDE8 80 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 STX3Q13277 289 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 CCDC153Q494R4 210 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 LBHQ53QV2 105 aaPredicted RBP3.6□□□□□ -1.83
LRRC28-222ENST00000561431 COQ5Q5HYK3 327 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 SLC35D2Q76EJ3 337 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 ARCQ7LC44 396 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 TMPRSS11BQ86T26 416 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 ANKRD46Q86W74 232 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 TMEM25Q86YD3 366 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 SLC13A5Q86YT5 568 aaPredicted RBP3.6□□□□□ -1.83
LRRC28-222ENST00000561431 PLD3Q8IV08 490 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 TMEM139Q8IV31 216 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 CLEC4FQ8N1N0 589 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 STPG4Q8N801 248 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 OR2T12Q8NG77 320 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 OR5T3Q8NGG3 340 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 OR13J1Q8NGT2 312 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 PNPT1Q8TCS8 783 aaKnown RBP3.6□□□□□ -1.83
LRRC28-222ENST00000561431 GIPC3Q8TF64 312 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 LZICQ8WZA0 190 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 ELMO1Q92556 727 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 NDRG1Q92597 394 aaKnown RBP3.6□□□□□ -1.83
LRRC28-222ENST00000561431 ECHDC3Q96DC8 303 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 RASL10BQ96S79 203 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 OMDQ99983 421 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 NAT9Q9BTE0 207 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 ULBP1Q9BZM6 244 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 TM6SF2Q9BZW4 377 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 OR2B2Q9GZK3 357 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 TOLLIPQ9H0E2 274 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 MTHFD2LQ9H903 347 aaPredicted RBP3.6□□□□□ -1.83
LRRC28-222ENST00000561431 ANKRA2Q9H9E1 313 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 PELI2Q9HAT8 420 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 LYRM4Q9HD34 91 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 SLC40A1Q9NP59 571 aa3.6□□□□□ -1.83
LRRC28-222ENST00000561431 CHST11Q9NPF2 352 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms