RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 HSD17B8Q92506 261 aa6.51□□□□□ -1.37
ZEB1-223ENST00000561304 APH1AQ96BI3 265 aa6.51□□□□□ -1.37
ZEB1-223ENST00000561304 C3orf49Q96BT1 292 aa6.51□□□□□ -1.37
ZEB1-223ENST00000561304 THOC1Q96FV9 657 aaKnown RBP6.51□□□□□ -1.37
ZEB1-223ENST00000561304 ATP6V1G3Q96LB4 118 aa6.51□□□□□ -1.37
ZEB1-223ENST00000561304 ZNF385AQ96PM9 386 aaKnown RBP6.51□□□□□ -1.37
ZEB1-223ENST00000561304 TRIM2Q9C040 744 aa6.51□□□□□ -1.37
ZEB1-223ENST00000561304 RMND5AQ9H871 391 aa6.51□□□□□ -1.37
ZEB1-223ENST00000561304 FANCFQ9NPI8 374 aa6.51□□□□□ -1.37
ZEB1-223ENST00000561304 ZNF701Q9NV72 531 aaPredicted RBP6.51□□□□□ -1.37
ZEB1-223ENST00000561304 EMC3Q9P0I2 261 aa6.51□□□□□ -1.37
ZEB1-223ENST00000561304 MALT1Q9UDY8 824 aa6.51□□□□□ -1.37
ZEB1-223ENST00000561304 FLVCR1Q9Y5Y0 555 aa6.51□□□□□ -1.37
ZEB1-223ENST00000561304 ALPK2Q86TB3 2170 aa6.51□□□□□ -1.37
ZEB1-223ENST00000561304 ABCA2Q9BZC7 2435 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 A0A096LPI6 279 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 OR5H1A6NKK0 313 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 OVOL3O00110 214 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 CLIC1O00299 241 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 ABCD4O14678 606 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 POLR3GO15318 223 aaPredicted RBP6.5□□□□□ -1.37
ZEB1-223ENST00000561304 ARHGEF9O43307 516 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 DNPH1O43598 174 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 NPIPB7O75200 414 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 NDUFS7O75251 213 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 CNOT4O95628 575 aaKnown RBP6.5□□□□□ -1.37
ZEB1-223ENST00000561304 CD8AP01732 235 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 HEXAP06865 529 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 GGT1P19440 569 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 HTR2AP28223 471 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 MAGEA8P43361 318 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 CLK1P49759 484 aaKnown RBP6.5□□□□□ -1.37
ZEB1-223ENST00000561304 SLC35A1P78382 337 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 TAGLNQ01995 201 aaKnown RBP6.5□□□□□ -1.37
ZEB1-223ENST00000561304 EGR4Q05215 589 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 KRTAP1-1Q07627 177 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 FAPQ12884 760 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 SLC17A1Q14916 467 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 GABRA6Q16445 453 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 GLIPR1L2Q4G1C9 344 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 TIMM23BQ5SRD1 257 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 OTUD3Q5T2D3 398 aaPredicted RBP6.5□□□□□ -1.37
ZEB1-223ENST00000561304 LRIF1Q5T3J3 769 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 TSPO2Q5TGU0 170 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 PRSS57Q6UWY2 283 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 LINGO2Q7L985 606 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 UBE2J2Q8N2K1 259 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 ZIC4Q8N9L1 334 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 OR9K2Q8NGE7 335 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 NFKBIDQ8NI38 313 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 LRRC8CQ8TDW0 803 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 FBXW5Q969U6 566 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 DDIT4LQ96D03 193 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 SPDL1Q96EA4 605 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 ZHX1-C8orf76Q96EF9 292 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 WFDC6Q9BQY6 131 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 PTDSS2Q9BVG9 487 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 SPATA9Q9BWV2 254 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 KRTAP4-7Q9BYR0 210 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 ESRP2Q9H6T0 727 aaKnown RBP6.5□□□□□ -1.37
ZEB1-223ENST00000561304 A4GALTQ9NPC4 353 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 SLC7A10Q9NS82 523 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 CALML5Q9NZT1 146 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 CCDC167Q9P0B6 97 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 VAPAQ9P0L0 249 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 SEC14L4Q9UDX3 406 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 TRAPPC4Q9Y296 219 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 SLC25A15Q9Y619 301 aa6.5□□□□□ -1.37
ZEB1-223ENST00000561304 A0A0G2JPF8 293 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 AQP7P3A6NL99 342 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 HNRNPCL2B2RXH8 293 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 HNRNPCL3B7ZW38 293 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 FTCDNL1E5RQL4 147 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 E7EQL1 145 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 TPST1O60507 370 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 HNRNPCL1O60812 293 aaKnown RBP6.49□□□□□ -1.37
ZEB1-223ENST00000561304 MRPL33O75394 65 aaKnown RBP6.49□□□□□ -1.37
ZEB1-223ENST00000561304 IGLV1-40P01703 118 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 IGHV4-39P01824 125 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 HNRNPCL4P0DMR1 293 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 CXCR1P25024 350 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 IDUAP35475 653 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 ZNF83P51522 516 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 AQP5P55064 265 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 CDH11P55287 796 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 ATP5J2P56134 94 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 RPS4XP62701 263 aaKnown RBP6.49□□□□□ -1.37
ZEB1-223ENST00000561304 FADDQ13158 208 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 SELPLGQ14242 412 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 GNA13Q14344 377 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 LARS2Q15031 903 aaKnown RBP6.49□□□□□ -1.37
ZEB1-223ENST00000561304 KRTAP21-3Q3LHN1 58 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 ZNF311Q5JNZ3 666 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 WBP2NLQ6ICG8 309 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 PAQR6Q6TCH4 344 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 ZNF440Q8IYI8 595 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 WDR31Q8NA23 367 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 MAPK1IP1LQ8NDC0 245 aa6.49□□□□□ -1.37
ZEB1-223ENST00000561304 SMAP2Q8WU79 429 aaPredicted RBP6.49□□□□□ -1.37
ZEB1-223ENST00000561304 PMM1Q92871 262 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms