RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 KLHL24Q6TFL4 600 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 CLEC2AQ6UVW9 174 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 EPGNQ6UW88 154 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 STK35Q8TDR2 534 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 HTRA1Q92743 480 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 MAL2Q969L2 176 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 OBP2BQ9NPH6 170 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 TMEM45AQ9NWC5 275 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 USH1CQ9Y6N9 552 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 CHD3Q12873 2000 aaKnown RBP14.17□□□□□ -0.14
SNX1-213ENST00000561026 A0A096LNT2 108 aa14.17□□□□□ -0.14
SNX1-213ENST00000561026 ATP6V1G2-DDX39BF2Z307 99 aa14.17□□□□□ -0.14
SNX1-213ENST00000561026 BMP4P12644 408 aa14.17□□□□□ -0.14
SNX1-213ENST00000561026 APOBEC3AP31941 199 aaPredicted RBP14.17□□□□□ -0.14
SNX1-213ENST00000561026 SELENOPP49908 381 aa14.17□□□□□ -0.14
SNX1-213ENST00000561026 HOXC5Q00444 222 aa14.17□□□□□ -0.14
SNX1-213ENST00000561026 FADDQ13158 208 aa14.17□□□□□ -0.14
SNX1-213ENST00000561026 BEND6Q5SZJ8 279 aaPredicted RBP14.17□□□□□ -0.14
SNX1-213ENST00000561026 EPHX4Q8IUS5 362 aa14.17□□□□□ -0.14
SNX1-213ENST00000561026 MFSD8Q8NHS3 518 aa14.17□□□□□ -0.14
SNX1-213ENST00000561026 SLC35B4Q969S0 331 aa14.17□□□□□ -0.14
SNX1-213ENST00000561026 RAD21L1Q9H4I0 556 aa14.17□□□□□ -0.14
SNX1-213ENST00000561026 YAE1D1Q9NRH1 226 aa14.17□□□□□ -0.14
SNX1-213ENST00000561026 MOKQ9UQ07 419 aa14.17□□□□□ -0.14
SNX1-213ENST00000561026 RASD1Q9Y272 281 aa14.17□□□□□ -0.14
SNX1-213ENST00000561026 ANK3Q12955 4377 aaKnown RBP14.17□□□□□ -0.14
SNX1-213ENST00000561026 OR6C65A6NJZ3 312 aa14.16□□□□□ -0.14
SNX1-213ENST00000561026 FTCDNL1E5RQL4 147 aa14.16□□□□□ -0.14
SNX1-213ENST00000561026 ZNF587BE7ETH6 402 aa14.16□□□□□ -0.14
SNX1-213ENST00000561026 GPRIN2O60269 458 aa14.16□□□□□ -0.14
SNX1-213ENST00000561026 ERLIN1O75477 346 aa14.16□□□□□ -0.14
SNX1-213ENST00000561026 AHSA1O95433 338 aa14.16□□□□□ -0.14
SNX1-213ENST00000561026 LGI1O95970 557 aa14.16□□□□□ -0.14
SNX1-213ENST00000561026 HOXB9P17482 250 aaPredicted RBP14.16□□□□□ -0.14
SNX1-213ENST00000561026 MRPL19P49406 292 aaKnown RBP14.16□□□□□ -0.14
SNX1-213ENST00000561026 EGR4Q05215 589 aa14.16□□□□□ -0.14
SNX1-213ENST00000561026 CHRNB3Q05901 458 aa14.16□□□□□ -0.14
SNX1-213ENST00000561026 LGALS3BPQ08380 585 aa14.16□□□□□ -0.14
SNX1-213ENST00000561026 TBRG1Q3YBR2 411 aa14.16□□□□□ -0.14
SNX1-213ENST00000561026 ZNF525Q8N782 197 aa14.16□□□□□ -0.14
SNX1-213ENST00000561026 OR1K1Q8NGR3 316 aa14.16□□□□□ -0.14
SNX1-213ENST00000561026 BBS10Q8TAM1 723 aa14.16□□□□□ -0.14
SNX1-213ENST00000561026 PTDSS2Q9BVG9 487 aa14.16□□□□□ -0.14
SNX1-213ENST00000561026 SLC25A37Q9NYZ2 338 aa14.16□□□□□ -0.14
SNX1-213ENST00000561026 ELOA3DA6NLF2 546 aaPredicted RBP14.15□□□□□ -0.14
SNX1-213ENST00000561026 TGDSO95455 350 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 PNMTP11086 282 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 ETS2P15036 469 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 PAX7P23759 505 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 RPS5P46782 204 aaKnown RBP14.15□□□□□ -0.14
SNX1-213ENST00000561026 EFNA4P52798 201 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 MST1LQ2TV78 715 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 ELOA3BQ3SY89 546 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 NIPAL3Q6P499 406 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 C6orf89Q6UWU4 347 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 LINGO2Q7L985 606 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 HIPK1Q86Z02 1210 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 FUNDC1Q8IVP5 155 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 KDM8Q8N371 416 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 GOLGA6L1Q8N7Z2 621 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 ELOA3Q8NG57 546 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 BCL2L2Q92843 193 aaPredicted RBP14.15□□□□□ -0.14
SNX1-213ENST00000561026 SLC25A36Q96CQ1 311 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 KTI12Q96EK9 354 aaPredicted RBP14.15□□□□□ -0.14
SNX1-213ENST00000561026 C7orf26Q96N11 449 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 ALKBH3Q96Q83 286 aaPredicted RBP14.15□□□□□ -0.14
SNX1-213ENST00000561026 TNFRSF13CQ96RJ3 184 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 RSPO3Q9BXY4 272 aaPredicted RBP14.15□□□□□ -0.14
SNX1-213ENST00000561026 TCF7L2Q9NQB0 619 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 PMF1-BGLAPU3KQ54 211 aa14.15□□□□□ -0.14
SNX1-213ENST00000561026 RTTNQ86VV8 2226 aa14.14□□□□□ -0.15
SNX1-213ENST00000561026 IGHV1-18A0A0C4DH31 117 aa14.14□□□□□ -0.15
SNX1-213ENST00000561026 A8MV72 311 aaPredicted RBP14.14□□□□□ -0.15
SNX1-213ENST00000561026 C5orf58C9J3I9 102 aa14.14□□□□□ -0.15
SNX1-213ENST00000561026 UPK3AO75631 287 aa14.14□□□□□ -0.15
SNX1-213ENST00000561026 PRKAR1BP31321 381 aa14.14□□□□□ -0.15
SNX1-213ENST00000561026 IDH3AP50213 366 aa14.14□□□□□ -0.15
SNX1-213ENST00000561026 STX1BP61266 288 aa14.14□□□□□ -0.15
SNX1-213ENST00000561026 LOXL1Q08397 574 aaPredicted RBP14.14□□□□□ -0.15
SNX1-213ENST00000561026 SWI5Q1ZZU3 235 aa14.14□□□□□ -0.15
SNX1-213ENST00000561026 TMEM249Q2WGJ8 235 aa14.14□□□□□ -0.15
SNX1-213ENST00000561026 LRIF1Q5T3J3 769 aa14.14□□□□□ -0.15
SNX1-213ENST00000561026 BLOC1S3Q6QNY0 202 aa14.14□□□□□ -0.15
SNX1-213ENST00000561026 MSRB3Q8IXL7 192 aa14.14□□□□□ -0.15
SNX1-213ENST00000561026 MAGEE2Q8TD90 523 aaPredicted RBP14.14□□□□□ -0.15
SNX1-213ENST00000561026 FAM168AQ92567 244 aa14.14□□□□□ -0.15
SNX1-213ENST00000561026 ZNF317Q96PQ6 595 aaPredicted RBP14.14□□□□□ -0.15
SNX1-213ENST00000561026 SLC38A2Q96QD8 506 aa14.14□□□□□ -0.15
SNX1-213ENST00000561026 LINC00470Q9BZP3 86 aa14.14□□□□□ -0.15
SNX1-213ENST00000561026 SLAMF8Q9P0V8 285 aa14.14□□□□□ -0.15
SNX1-213ENST00000561026 RPS6KB2Q9UBS0 482 aa14.14□□□□□ -0.15
SNX1-213ENST00000561026 MXRA5Q9NR99 2828 aa14.14□□□□□ -0.15
SNX1-213ENST00000561026 ARPC4-TTLL3A0A0A6YYG9 625 aa14.13□□□□□ -0.15
SNX1-213ENST00000561026 POLR3GO15318 223 aaPredicted RBP14.13□□□□□ -0.15
SNX1-213ENST00000561026 OR2T1O43869 369 aa14.13□□□□□ -0.15
SNX1-213ENST00000561026 FZD7O75084 574 aa14.13□□□□□ -0.15
SNX1-213ENST00000561026 ZNF432O94892 652 aa14.13□□□□□ -0.15
SNX1-213ENST00000561026 F12P00748 615 aaPredicted RBP14.13□□□□□ -0.15
SNX1-213ENST00000561026 SLC25A16P16260 332 aa14.13□□□□□ -0.15
SNX1-213ENST00000561026 ZNF43P17038 809 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms