RNA–Protein interactions for RNA: ENST00000560982.5

USP8-215, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 3

Gene USP8, Length 410 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-215ENST00000560982 SDR39U1Q9NRG7 319 aaPredicted RBP12.21□□□□□ -0.45
USP8-215ENST00000560982 TMEM45AQ9NWC5 275 aa12.21□□□□□ -0.45
USP8-215ENST00000560982 THUMPD1Q9NXG2 353 aaKnown RBP12.21□□□□□ -0.45
USP8-215ENST00000560982 NKIRAS1Q9NYS0 192 aa12.21□□□□□ -0.45
USP8-215ENST00000560982 MOKQ9UQ07 419 aa12.21□□□□□ -0.45
USP8-215ENST00000560982 IFT52Q9Y366 437 aa12.21□□□□□ -0.45
USP8-215ENST00000560982 CHST2Q9Y4C5 530 aa12.21□□□□□ -0.45
USP8-215ENST00000560982 PMF1-BGLAPU3KQ54 211 aa12.21□□□□□ -0.45
USP8-215ENST00000560982 A0A096LPI6 279 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 ZNF587BE7ETH6 402 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 NPIPB7O75200 414 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 LGI1O95970 557 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 IFNA2P01563 188 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 SELENOPP49908 381 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 EFNA4P52798 201 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 SLC18A1P54219 525 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 LGALS3BPQ08380 585 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 TBRG1Q3YBR2 411 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 CHRFAM7AQ494W8 412 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 ZNF311Q5JNZ3 666 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 C6orf52Q5T4I8 152 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 PRAMEF8Q5VWM4 474 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 PRAMEF7Q5VXH5 474 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 NIPAL3Q6P499 406 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 PODNL1Q6PEZ8 512 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 CREB3L2Q70SY1 520 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 OR1K1Q8NGR3 316 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 BOD1Q96IK1 185 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 ALKBH3Q96Q83 286 aaPredicted RBP12.2□□□□□ -0.46
USP8-215ENST00000560982 RASD1Q9Y272 281 aa12.2□□□□□ -0.46
USP8-215ENST00000560982 CUBNO60494 3623 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 ALPK2Q86TB3 2170 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 IGHV1-18A0A0C4DH31 117 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 OR6C65A6NJZ3 312 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 TMEM229AB2RXF0 380 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 LY6HO94772 140 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 AHSA1O95433 338 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 CSF3P09919 207 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 NUDT7P0C024 238 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 UBE2NP61088 152 aaKnown RBP12.19□□□□□ -0.46
USP8-215ENST00000560982 MAGOHP61326 146 aaKnown RBP12.19□□□□□ -0.46
USP8-215ENST00000560982 VLDLRP98155 873 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 RGNQ15493 299 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 EPHX4Q8IUS5 362 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 MIER2Q8N344 545 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 STK35Q8TDR2 534 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 C10orf105Q8TEF2 133 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 SLC25A36Q96CQ1 311 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 FBXO17Q96EF6 278 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 SLC38A2Q96QD8 506 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 KCNS3Q9BQ31 491 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 PAIP1Q9H074 479 aaKnown RBP12.19□□□□□ -0.46
USP8-215ENST00000560982 PCDHB14Q9Y5E9 798 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 RTTNQ86VV8 2226 aa12.19□□□□□ -0.46
USP8-215ENST00000560982 YLPM1P49750 1951 aaKnown RBP12.18□□□□□ -0.46
USP8-215ENST00000560982 ZNF500O60304 480 aaPredicted RBP12.18□□□□□ -0.46
USP8-215ENST00000560982 UPK3AO75631 287 aa12.18□□□□□ -0.46
USP8-215ENST00000560982 F12P00748 615 aaPredicted RBP12.18□□□□□ -0.46
USP8-215ENST00000560982 PNMTP11086 282 aa12.18□□□□□ -0.46
USP8-215ENST00000560982 GTF2E2P29084 291 aaKnown RBP12.18□□□□□ -0.46
USP8-215ENST00000560982 RPS5P46782 204 aaKnown RBP12.18□□□□□ -0.46
USP8-215ENST00000560982 HOXC5Q00444 222 aa12.18□□□□□ -0.46
USP8-215ENST00000560982 SWI5Q1ZZU3 235 aa12.18□□□□□ -0.46
USP8-215ENST00000560982 MST1LQ2TV78 715 aa12.18□□□□□ -0.46
USP8-215ENST00000560982 SLC2A7Q6PXP3 512 aa12.18□□□□□ -0.46
USP8-215ENST00000560982 LINGO2Q7L985 606 aa12.18□□□□□ -0.46
USP8-215ENST00000560982 KDM8Q8N371 416 aa12.18□□□□□ -0.46
USP8-215ENST00000560982 MFSD8Q8NHS3 518 aa12.18□□□□□ -0.46
USP8-215ENST00000560982 BBS10Q8TAM1 723 aa12.18□□□□□ -0.46
USP8-215ENST00000560982 NANOS1Q8WY41 292 aaKnown RBP12.18□□□□□ -0.46
USP8-215ENST00000560982 GTF2H4Q92759 462 aa12.18□□□□□ -0.46
USP8-215ENST00000560982 PROX1Q92786 737 aa12.18□□□□□ -0.46
USP8-215ENST00000560982 MAL2Q969L2 176 aa12.18□□□□□ -0.46
USP8-215ENST00000560982 PTDSS2Q9BVG9 487 aa12.18□□□□□ -0.46
USP8-215ENST00000560982 RAD21L1Q9H4I0 556 aa12.18□□□□□ -0.46
USP8-215ENST00000560982 BCL2L10Q9HD36 194 aa12.18□□□□□ -0.46
USP8-215ENST00000560982 A4GALTQ9NPC4 353 aa12.18□□□□□ -0.46
USP8-215ENST00000560982 A0A096LPE4 126 aa12.17□□□□□ -0.46
USP8-215ENST00000560982 ARPC4-TTLL3A0A0A6YYG9 625 aa12.17□□□□□ -0.46
USP8-215ENST00000560982 A0A1W2PPZ6 126 aa12.17□□□□□ -0.46
USP8-215ENST00000560982 RNF212BA8MTL3 300 aa12.17□□□□□ -0.46
USP8-215ENST00000560982 C5orf58C9J3I9 102 aa12.17□□□□□ -0.46
USP8-215ENST00000560982 FTCDNL1E5RQL4 147 aa12.17□□□□□ -0.46
USP8-215ENST00000560982 CLIC1O00299 241 aa12.17□□□□□ -0.46
USP8-215ENST00000560982 NR5A2O00482 541 aa12.17□□□□□ -0.46
USP8-215ENST00000560982 CRYAAP02489 173 aa12.17□□□□□ -0.46
USP8-215ENST00000560982 USF1P22415 310 aaPredicted RBP12.17□□□□□ -0.46
USP8-215ENST00000560982 PAX7P23759 505 aa12.17□□□□□ -0.46
USP8-215ENST00000560982 CLDN17P56750 224 aa12.17□□□□□ -0.46
USP8-215ENST00000560982 SNRPD2P62316 118 aaKnown RBP12.17□□□□□ -0.46
USP8-215ENST00000560982 TUBA1BP68363 451 aa12.17□□□□□ -0.46
USP8-215ENST00000560982 TUBA4AP68366 448 aa12.17□□□□□ -0.46
USP8-215ENST00000560982 ROR2Q01974 943 aaKnown RBP12.17□□□□□ -0.46
USP8-215ENST00000560982 EGR4Q05215 589 aa12.17□□□□□ -0.46
USP8-215ENST00000560982 FADDQ13158 208 aa12.17□□□□□ -0.46
USP8-215ENST00000560982 ANKRD16Q6P6B7 361 aa12.17□□□□□ -0.46
USP8-215ENST00000560982 TUBA1AQ71U36 451 aa12.17□□□□□ -0.46
USP8-215ENST00000560982 BCL2L2Q92843 193 aaPredicted RBP12.17□□□□□ -0.46
USP8-215ENST00000560982 SLC35B4Q969S0 331 aa12.17□□□□□ -0.46
USP8-215ENST00000560982 TLCD1Q96CP7 247 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms