RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 NECAP2Q9NVZ3 263 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 QPCTLQ9NXS2 382 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 SLC25A37Q9NYZ2 338 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 RNF14Q9UBS8 474 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 TRAPPC4Q9Y296 219 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 SCN2AQ99250 2005 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 MAP3K15Q6ZN16 1313 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 IGKV2-28A0A075B6P5 120 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 PPIAL4EA0A075B759 164 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 BICDL2A1A5D9 508 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 PRRG1O14668 218 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 SLC31A2O15432 143 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 IGKV2D-28P01615 120 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 KLK3P07288 261 aaPredicted RBP2.53□□□□□ -2
PSMA4-221ENST00000560842 HEXBP07686 556 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 PPIAL4FP0DN26 164 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 HSPA5P11021 654 aaKnown RBP2.53□□□□□ -2
PSMA4-221ENST00000560842 ZNF44P15621 663 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 HNF1AP20823 631 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 GCAP28676 217 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 FMO3P31513 532 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 NMUP48645 174 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 EFNB2P52799 333 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 PKNOX1P55347 436 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 ELP6Q0PNE2 266 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 KLRB1Q12918 225 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 TPD52L1Q16890 204 aaPredicted RBP2.53□□□□□ -2
PSMA4-221ENST00000560842 SAMD4BQ5PRF9 694 aaKnown RBP2.53□□□□□ -2
PSMA4-221ENST00000560842 C10orf120Q5SQS8 335 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 OR52E8Q6IFG1 317 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 KCNIP4Q6PIL6 250 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 ZNF620Q6ZNG0 422 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 SLC26A11Q86WA9 606 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 SLC35F2Q8IXU6 374 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 FAM133AQ8N9E0 248 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 ACOT11Q8WXI4 607 aaPredicted RBP2.53□□□□□ -2
PSMA4-221ENST00000560842 FGF14Q92915 247 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 CMTM7Q96FZ5 175 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 OXGR1Q96P68 337 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 RAB33BQ9H082 229 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 SRMSQ9H3Y6 488 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 RANBP3Q9H6Z4 567 aaPredicted RBP2.53□□□□□ -2
PSMA4-221ENST00000560842 NTN4Q9HB63 628 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 IL26Q9NPH9 171 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 LHX9Q9NQ69 397 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 UFSP2Q9NUQ7 469 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 SMOXQ9NWM0 555 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 TMOD2Q9NZR1 351 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 TRAF3IP3Q9Y228 551 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 MEMO1Q9Y316 297 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 TIMM10BQ9Y5J6 103 aa2.53□□□□□ -2
PSMA4-221ENST00000560842 KIF16BQ96L93 1317 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 TCP11X1B4DZS4 312 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 HIP1O00291 1037 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 SS18L1O75177 396 aaPredicted RBP2.52□□□□□ -2.01
PSMA4-221ENST00000560842 PEX11AO75192 247 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 GIPP09681 153 aaPredicted RBP2.52□□□□□ -2.01
PSMA4-221ENST00000560842 PNMA6AP0CW24 399 aaPredicted RBP2.52□□□□□ -2.01
PSMA4-221ENST00000560842 IGFBP3P17936 291 aaPredicted RBP2.52□□□□□ -2.01
PSMA4-221ENST00000560842 ATP6V1C1P21283 382 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 GGTLC2Q14390 218 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 KIAA0087Q14695 138 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 DPYSL2Q16555 572 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 GPR157Q5UAW9 335 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 TMEM225Q6GV28 225 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 NLRP9Q7RTR0 991 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 CCDC50Q8IVM0 306 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 C12orf56Q8IXR9 622 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 GMCL1P1Q8NEA9 526 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 ACER1Q8TDN7 264 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 RLN3Q8WXF3 142 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 UBE2E3Q969T4 207 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 GLRX2Q9NS18 164 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 MRPS33Q9Y291 106 aaKnown RBP2.52□□□□□ -2.01
PSMA4-221ENST00000560842 SLC25A15Q9Y619 301 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 LRP4O75096 1905 aa2.52□□□□□ -2.01
PSMA4-221ENST00000560842 CARMIL3Q8ND23 1372 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 FANCIQ9NVI1 1328 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 NSG1A0A0A6YYJ2 146 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 AIREO43918 545 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 DFNA5O60443 496 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 TBPP20226 339 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 PCMT1P22061 227 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 BTCP35070 178 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 QARSP47897 775 aaKnown RBP2.51□□□□□ -2.01
PSMA4-221ENST00000560842 CASP4P49662 377 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 OXA1LQ15070 435 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 RSPO1Q2MKA7 263 aaPredicted RBP2.51□□□□□ -2.01
PSMA4-221ENST00000560842 SFT2D3Q587I9 215 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 LRRC10Q5BKY1 277 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 MARCH8Q5T0T0 291 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 HSDL2Q6YN16 418 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 CCDC80Q76M96 950 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 OR4F15Q8NGB8 312 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 TRMT10AQ8TBZ6 339 aaKnown RBP2.51□□□□□ -2.01
PSMA4-221ENST00000560842 MCOLN3Q8TDD5 553 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 LRRC58Q96CX6 371 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 ASB9Q96DX5 294 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 RNF2Q99496 336 aa2.51□□□□□ -2.01
PSMA4-221ENST00000560842 CAPS2Q9BXY5 557 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms