RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 FNDC11Q9BVV2 318 aa13.79□□□□□ -0.2
LYSMD2-204ENST00000560491 GP6Q9HCN6 339 aa13.79□□□□□ -0.2
LYSMD2-204ENST00000560491 MEPEQ9NQ76 525 aaPredicted RBP13.79□□□□□ -0.2
LYSMD2-204ENST00000560491 C6orf203Q9P0P8 240 aaPredicted RBP13.79□□□□□ -0.2
LYSMD2-204ENST00000560491 IGKV3D-15A0A087WSY6 115 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 ENO4A6NNW6 628 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 ZNF724A8MTY0 619 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 A8MXE2 369 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 ACOT8O14734 319 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 MSTNO14793 375 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 CD8BP10966 210 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 EDNRAP25101 427 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 UQCRC1P31930 480 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 IFNA8P32881 189 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 RBM34P42696 430 aaKnown RBP13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 SLC16A1P53985 500 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 LSM11P83369 360 aaKnown RBP eCLIP13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 SNTB1Q13884 538 aaKnown RBP13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 SLC17A1Q14916 467 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 PDK3Q15120 406 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 IQCCQ4KMZ1 466 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 MTX3Q5HYI7 312 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 ZNF474Q6S9Z5 364 aaPredicted RBP13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 CYP4Z1Q86W10 505 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 KDM8Q8N371 416 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 TMEM239Q8WW34 195 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 MCUR1Q96AQ8 359 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 SEPHS2Q99611 448 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 RBM24Q9BX46 236 aaKnown RBP13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 LRMDAQ9H2I8 198 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 CHST11Q9NPF2 352 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 C20orf141Q9NUB4 165 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 FREM1Q5H8C1 2179 aa13.78□□□□□ -0.2
LYSMD2-204ENST00000560491 CH25HO95992 272 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 MT-ND1P03886 318 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 FABP3P05413 133 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 RHCEP18577 417 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 NTF4P34130 210 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 RASSF2P50749 326 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 TRAP1Q12931 704 aaKnown RBP13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 TRAM2Q15035 370 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 ZNF74Q16587 644 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 EXOC3L2Q2M3D2 409 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 FBXL19-AS1Q494R0 122 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 TMEM225Q6GV28 225 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 CCDC121Q6ZUS5 278 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 SLC46A3Q7Z3Q1 461 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 GALNT5Q7Z7M9 940 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 MEX3DQ86XN8 651 aaKnown RBP13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 ADGRG4Q8IZF6 3080 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 LRRC17Q8N6Y2 441 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 PIK3C3Q8NEB9 887 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 OR9K2Q8NGE7 335 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 OR6S1Q8NH40 331 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 RNASE6Q93091 150 aaKnown RBP13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 LRGUKQ96M69 825 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 TACO1Q9BSH4 297 aaKnown RBP13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 SLC19A3Q9BZV2 496 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 NMNAT1Q9HAN9 279 aaPredicted RBP13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 PLSCR4Q9NRQ2 329 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 GALNT8Q9NY28 637 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 EMC3Q9P0I2 261 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 SLC7A8Q9UHI5 535 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 POMPQ9Y244 141 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 NOSIPQ9Y314 301 aaKnown RBP13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 MED31Q9Y3C7 131 aa13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 FAM32AQ9Y421 112 aaKnown RBP13.77□□□□□ -0.21
LYSMD2-204ENST00000560491 STAMBPO95630 424 aa13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 H1F0P07305 194 aaKnown RBP13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 NQO1P15559 274 aaKnown RBP13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 ERFP50548 548 aa13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 PMS2P3Q13401 168 aa13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 FLOT2Q14254 428 aa13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 TFAP2EQ6VUC0 442 aa13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 H1FNTQ75WM6 255 aaPredicted RBP13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 ZDHHC21Q8IVQ6 265 aa13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 HS6ST2Q96MM7 605 aa13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 ZNF385AQ96PM9 386 aaKnown RBP13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 SF3B5Q9BWJ5 86 aaKnown RBP13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 ASPNQ9BXN1 380 aa13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 TRIM15Q9C019 465 aa13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 IL1RAPQ9NPH3 570 aa13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 B3GAT1Q9P2W7 334 aa13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 PRSS50Q9UI38 385 aa13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 RASD1Q9Y272 281 aa13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 TESMINQ9Y4I5 508 aa13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 CORINQ9Y5Q5 1042 aa13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 FLVCR1Q9Y5Y0 555 aa13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 NBPF19A0A087WUL8 3843 aa13.76□□□□□ -0.21
LYSMD2-204ENST00000560491 EBAG9O00559 213 aa13.75□□□□□ -0.21
LYSMD2-204ENST00000560491 GPR171O14626 319 aa13.75□□□□□ -0.21
LYSMD2-204ENST00000560491 HPRP00739 348 aa13.75□□□□□ -0.21
LYSMD2-204ENST00000560491 MT-ATP6P00846 226 aa13.75□□□□□ -0.21
LYSMD2-204ENST00000560491 UMPSP11172 480 aa13.75□□□□□ -0.21
LYSMD2-204ENST00000560491 ITGA2P17301 1181 aa13.75□□□□□ -0.21
LYSMD2-204ENST00000560491 IGFBP2P18065 325 aa13.75□□□□□ -0.21
LYSMD2-204ENST00000560491 IL1RL1Q01638 556 aa13.75□□□□□ -0.21
LYSMD2-204ENST00000560491 SPIBQ01892 262 aa13.75□□□□□ -0.21
LYSMD2-204ENST00000560491 FAM27E3Q08E93 113 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms