RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 FN3KRPQ9HA64 309 aa3.92□□□□□ -1.78
MARK3-220ENST00000560417 COX16Q9P0S2 106 aa3.92□□□□□ -1.78
MARK3-220ENST00000560417 SPATA31E1Q6ZUB1 1445 aa3.92□□□□□ -1.78
MARK3-220ENST00000560417 SETBP1Q9Y6X0 1596 aa3.92□□□□□ -1.78
MARK3-220ENST00000560417 PLEKHG1Q9ULL1 1385 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 CPS1P31327 1500 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 IGKV1D-8A0A087WSZ0 117 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 SNTNA6NMZ2 147 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 DCTN6O00399 190 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 HDAC3O15379 428 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 DIRAS1O95057 198 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 NCK1P16333 377 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 RPS8P62241 208 aaKnown RBP3.91□□□□□ -1.78
MARK3-220ENST00000560417 VGLL4Q14135 290 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 ARL6IP1Q15041 203 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 NSUN5P1Q3KNT7 163 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 EOGTQ5NDL2 527 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 PDZK1Q5T2W1 519 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 OR2G6Q5TZ20 316 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 ARCQ7LC44 396 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 EFL1Q7Z2Z2 1120 aaKnown RBP3.91□□□□□ -1.78
MARK3-220ENST00000560417 FAM220AQ7Z4H9 259 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 TMEM179BQ7Z7N9 219 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 ST8SIA1Q92185 356 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 RAPGEF5Q92565 580 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 MAGEB18Q96M61 343 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 RBM14Q96PK6 669 aaKnown RBP3.91□□□□□ -1.78
MARK3-220ENST00000560417 NICN1Q9BSH3 213 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 ZDHHC11Q9H8X9 412 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 ISG20L2Q9H9L3 353 aaKnown RBP3.91□□□□□ -1.78
MARK3-220ENST00000560417 MCCC2Q9HCC0 563 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 IL17CQ9P0M4 197 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 ABCG2Q9UNQ0 655 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 UGT2A1Q9Y4X1 527 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 THSD7BQ9C0I4 1608 aa3.91□□□□□ -1.78
MARK3-220ENST00000560417 TMEM94Q12767 1356 aa3.9□□□□□ -1.78
MARK3-220ENST00000560417 CCDC144AA2RUR9 1427 aa3.9□□□□□ -1.78
MARK3-220ENST00000560417 ZNF318Q5VUA4 2279 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 TMEM110-MUSTN1A8MSY1 372 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 FCMRO60667 390 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 LGI1O95970 557 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 CALCRP30988 508 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 DDOSTP39656 456 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 MAGEA8P43361 318 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 STX17P56962 302 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 C11orf71Q6IPW1 123 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 GDPD3Q7L5L3 318 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 DHDDSQ86SQ9 333 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 TRIM69Q86WT6 500 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 TMEM252Q8N6L7 170 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 OR52I1Q8NGK6 324 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 LINC01006Q8NI28 216 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 MAIP1Q8WWC4 291 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 PLSCR3Q9NRY6 295 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 CD274Q9NZQ7 290 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 KIF25Q9UIL4 384 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 ROBO1Q9Y6N7 1651 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 SH3TC1Q8TE82 1336 aa3.9□□□□□ -1.79
MARK3-220ENST00000560417 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.9□□□□□ -1.79
MARK3-220ENST00000560417 RLFQ13129 1914 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 PLEKHH1Q9ULM0 1364 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 DIP2AQ14689 1571 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 KLLNB2CW77 178 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 HAT1O14929 419 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 RGS16O15492 202 aaPredicted RBP3.89□□□□□ -1.79
MARK3-220ENST00000560417 B4GALT2O60909 372 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 ATP5LO75964 103 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 STAMBPO95630 424 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 TSPAN12O95859 305 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 ZNF853P0CG23 659 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 RBMY1CP0DJD4 496 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 HMGB2P26583 209 aaKnown RBP3.89□□□□□ -1.79
MARK3-220ENST00000560417 GNA11P29992 359 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 HTR1FP30939 366 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 CCR1P32246 355 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 CCDC14Q49A88 953 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 CARD16Q5EG05 197 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 VRK2Q86Y07 508 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 OR2AP1Q8NGE2 309 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 MAGEE2Q8TD90 523 aaPredicted RBP3.89□□□□□ -1.79
MARK3-220ENST00000560417 ANKRD49Q8WVL7 239 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 FRAT1Q92837 279 aaPredicted RBP3.89□□□□□ -1.79
MARK3-220ENST00000560417 NT5C3BQ969T7 300 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 SEC22AQ96IW7 307 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 RPRD1AQ96P16 312 aaPredicted RBP3.89□□□□□ -1.79
MARK3-220ENST00000560417 RNF2Q99496 336 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 ARHGDIGQ99819 225 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 SELENOIQ9C0D9 397 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 REEP4Q9H6H4 257 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 SUDS3Q9H7L9 328 aaPredicted RBP3.89□□□□□ -1.79
MARK3-220ENST00000560417 COPS3Q9UNS2 423 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 PIGLQ9Y2B2 252 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 NKTRP30414 1462 aaKnown RBP3.89□□□□□ -1.79
MARK3-220ENST00000560417 IQSEC2Q5JU85 1478 aa3.89□□□□□ -1.79
MARK3-220ENST00000560417 DHX57Q6P158 1386 aaKnown RBP3.89□□□□□ -1.79
MARK3-220ENST00000560417 PIK3C2GO75747 1445 aa3.88□□□□□ -1.79
MARK3-220ENST00000560417 NRXN1Q9ULB1 1477 aa3.88□□□□□ -1.79
MARK3-220ENST00000560417 IGHV1OR21-1A0A087WYE8 117 aa3.88□□□□□ -1.79
MARK3-220ENST00000560417 FAM231BA6NCW3 169 aa3.88□□□□□ -1.79
MARK3-220ENST00000560417 PCP4L1A6NKN8 68 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms