RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CD1CP29017 333 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 PFN3P60673 137 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 C9orf50Q5SZB4 431 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 SLX4IPQ5VYV7 408 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 RTL6Q6ICC9 239 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 NEURL3Q96EH8 262 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 EGLN3Q9H6Z9 239 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 LYRM4Q9HD34 91 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 TMED7-TICAM2A0A0A6YYA0 188 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 GLB1P16278 677 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 SLC48A1Q6P1K1 146 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 PATE1Q8WXA2 126 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 TM4SF18Q96CE8 201 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 MED16Q9Y2X0 877 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 TMED7Q9Y3B3 224 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 DOCK6Q96HP0 2047 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 CLN5O75503 358 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 HEXAP06865 529 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 GABRB3P28472 473 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 CCR5P51681 352 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 DPTQ07507 201 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 RNF128Q8TEB7 428 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 C12orf49Q9H741 205 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 UBQLN2Q9UHD9 624 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 ABCA7Q8IZY2 2146 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 DIDO1Q9BTC0 2240 aaKnown RBP12.48□□□□□ -0.41
TRAF3-208ENST00000560371 SURF4O15260 269 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 ALDOBP05062 364 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 GIPRP48546 466 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 CNIH2Q6PI25 160 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 CCBE1Q6UXH8 406 aaPredicted RBP12.48□□□□□ -0.41
TRAF3-208ENST00000560371 NDUFAF7Q7L592 441 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 SLC35F3Q8IY50 421 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 WBP1LQ9NX94 342 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 BCL2A1Q16548 175 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 SLC35D2Q76EJ3 337 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 SULF2Q8IWU5 870 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 ELF4Q99607 663 aaPredicted RBP12.48□□□□□ -0.41
TRAF3-208ENST00000560371 TFPTP0C1Z6 253 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 MSR1P21757 451 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 PPP5CP53041 499 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 AKR1C8PQ5T2L2 129 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 ANKRD60Q9BZ19 345 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 EBF1Q9UH73 591 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 TRAV36DV7A0A075B6V5 113 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 HSPB6O14558 160 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 WNT11O96014 354 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 FOSL1P15407 271 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 AQP2P41181 271 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 P2RY14Q15391 338 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 LTC4SQ16873 150 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 ZNF808Q8N4W9 903 aaPredicted RBP12.47□□□□□ -0.41
TRAF3-208ENST00000560371 MSI2Q96DH6 328 aaKnown RBP12.47□□□□□ -0.41
TRAF3-208ENST00000560371 TMEM72A0PK05 275 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 METTL15A6NJ78 407 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 RPS2P15880 293 aaKnown RBP12.47□□□□□ -0.41
TRAF3-208ENST00000560371 CCSMST1Q4G0I0 132 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 CNOT9Q92600 299 aaKnown RBP12.47□□□□□ -0.41
TRAF3-208ENST00000560371 ELP4Q96EB1 424 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 BIRC8Q96P09 236 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 BABAM2Q9NXR7 383 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 DOCK8Q8NF50 2099 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 MTCL1Q9Y4B5 1905 aaKnown RBP12.47□□□□□ -0.41
TRAF3-208ENST00000560371 MEIS3P1A6NDR6 274 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 C2CD4DB7Z1M9 353 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 PRAMEF4O60810 478 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 AGAP7PQ5VUJ5 663 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 AGAP4Q96P64 663 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 TMEM165Q9HC07 324 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 TMEM100Q9NV29 134 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 ZNF281Q9Y2X9 895 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 STT3AP46977 705 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 HAGHLQ6PII5 290 aaPredicted RBP12.47□□□□□ -0.41
TRAF3-208ENST00000560371 TSSK4Q6SA08 328 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 ALG12Q9BV10 488 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 FAM117AQ9C073 453 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 PRMT8Q9NR22 394 aaPredicted RBP12.47□□□□□ -0.41
TRAF3-208ENST00000560371 PLXNB2O15031 1838 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 ATAD5Q96QE3 1844 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 HEATR1Q9H583 2144 aaKnown RBP12.47□□□□□ -0.41
TRAF3-208ENST00000560371 TRBV4-1A0A0J9YWV2 114 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 CDK1P06493 297 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 LEXMQ3ZCV2 418 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 LIN37Q96GY3 246 aaPredicted RBP12.47□□□□□ -0.41
TRAF3-208ENST00000560371 NRSN2Q9GZP1 204 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 ARAP2Q8WZ64 1704 aa12.47□□□□□ -0.41
TRAF3-208ENST00000560371 MCRIP1C9JLW8 97 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 PRKRAO75569 313 aaKnown RBP12.46□□□□□ -0.41
TRAF3-208ENST00000560371 SLC22A5O76082 557 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 GAAP10253 952 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 FGF14Q92915 247 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 CXorf36Q9H7Y0 433 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 CNOT2Q9NZN8 540 aaKnown RBP12.46□□□□□ -0.41
TRAF3-208ENST00000560371 LSM5Q9Y4Y9 91 aaKnown RBP12.46□□□□□ -0.41
TRAF3-208ENST00000560371 CACNA1EQ15878 2313 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 IDSB3KWA1 339 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 TNFSF15O95150 251 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 HTR2AP28223 471 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 PRRT1Q99946 306 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 MKRN2Q9H000 416 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms