RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 RIPK1Q13546 671 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 DGCR6Q14129 220 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 TRAM2Q15035 370 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 SNCBQ16143 134 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 PLEKHN1Q494U1 663 aaPredicted RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 CMPK2Q5EBM0 449 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 WBP2NLQ6ICG8 309 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 TMEM81Q6P7N7 255 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 ZNF613Q6PF04 617 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 SHQ1Q6PI26 577 aaKnown RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 KLHL17Q6TDP4 642 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 IZUMO2Q6UXV1 221 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 SLC46A3Q7Z3Q1 461 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 ZER1Q7Z7L7 766 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 STK32CQ86UX6 486 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 ADGRG3Q86Y34 549 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 KIF18BQ86Y91 864 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 MISPQ8IVT2 679 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 WDFY1Q8IWB7 410 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 ZNF440Q8IYI8 595 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 UBQLNLQ8IYU4 475 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 IQCF1Q8N6M8 205 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 LRRC17Q8N6Y2 441 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 LSMEM1Q8N8F7 131 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 Q8NA96 180 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 ZFP62Q8NB50 900 aaPredicted RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 TMEM178AQ8NBL3 297 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 AQP11Q8NBQ7 271 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 OR13C2Q8NGS9 318 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 OR5K1Q8NHB7 308 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 C9orf43Q8TAL5 461 aaPredicted RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 SNRNP27Q8WVK2 155 aaKnown RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 TMEM239Q8WW34 195 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 TAAR8Q969N4 342 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 EME1Q96AY2 570 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 ARL5BQ96KC2 179 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 MOGAT1Q96PD6 335 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 ZNF347Q96SE7 839 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 EPYCQ99645 322 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 PTDSS2Q9BVG9 487 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 SRXN1Q9BYN0 137 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 PLA2G12AQ9BZM1 189 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 TRIM2Q9C040 744 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 EGLN3Q9H6Z9 239 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 GP6Q9HCN6 339 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 GCM1Q9NP62 436 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 SDHAF3Q9NRP4 125 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 SELENONQ9NZV5 590 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 C6orf203Q9P0P8 240 aaPredicted RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 KIF17Q9P2E2 1029 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 SPRR3Q9UBC9 169 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 TMEFF2Q9UIK5 374 aaPredicted RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 BOKQ9UMX3 212 aaPredicted RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 KLF13Q9Y2Y9 288 aaPredicted RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 TMED7Q9Y3B3 224 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 ZNF337Q9Y3M9 751 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 PCDHGA9Q9Y5G4 932 aaKnown RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 KIAA1549Q9HCM3 1950 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 TLN1Q9Y490 2541 aaKnown RBP4.68□□□□□ -1.66
SPG11-220ENST00000559933 A0A087WUJ7 227 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 A0A0J9YW62 118 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 C7orf72A4D263 438 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 TMEM8BA6NDV4 472 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 CYSRT1A8MQ03 144 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 NPIPA5E9PKD4 350 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 G3V2T6 193 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 FAAHO00519 579 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 TNFSF11O14788 317 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 TFECO14948 347 aaPredicted RBP4.68□□□□□ -1.66
SPG11-220ENST00000559933 CASQ2O14958 399 aaPredicted RBP4.68□□□□□ -1.66
SPG11-220ENST00000559933 KLF4O43474 513 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 CBR3O75828 277 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 SERPINI2O75830 405 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 RASAL1O95294 804 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 SNAP29O95721 258 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 CLIC3O95833 236 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 BGLAPP02818 100 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 TFPIP10646 304 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 FCGR1AP12314 374 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 UQCRBP14927 111 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 PI3P19957 117 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 IGFBP5P24593 272 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 CXCR1P25024 350 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 OMPP47874 163 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 SUCLG1P53597 346 aaKnown RBP4.68□□□□□ -1.66
SPG11-220ENST00000559933 SUMO3P55854 103 aaPredicted RBP4.68□□□□□ -1.66
SPG11-220ENST00000559933 GFRA1P56159 465 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 CLDN15P56746 228 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 PPP2R2BQ00005 443 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 FHL1Q13642 323 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 DAG1Q14118 895 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 GK3PQ14409 553 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 OR7A5Q15622 319 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 MICAQ29983 383 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 TMEM44Q2T9K0 475 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 CTU2Q2VPK5 515 aaKnown RBP4.68□□□□□ -1.66
SPG11-220ENST00000559933 TMEM176BQ3YBM2 270 aaPredicted RBP4.68□□□□□ -1.66
SPG11-220ENST00000559933 GLYR1Q49A26 553 aaPredicted RBP4.68□□□□□ -1.66
SPG11-220ENST00000559933 CLEC12AQ5QGZ9 265 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 C6orf52Q5T4I8 152 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms