RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 TRAPPC4Q9Y296 219 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 A0A1W2PNR3 127 aa10.96□□□□□ -0.66
HERC1-205ENST00000559886 GJE1A6NN92 205 aa10.96□□□□□ -0.66
HERC1-205ENST00000559886 AQP2P41181 271 aa10.96□□□□□ -0.66
HERC1-205ENST00000559886 EFNB1P98172 346 aa10.96□□□□□ -0.66
HERC1-205ENST00000559886 MAD2L1BPQ15013 274 aaPredicted RBP10.96□□□□□ -0.66
HERC1-205ENST00000559886 CTU2Q2VPK5 515 aaKnown RBP10.96□□□□□ -0.66
HERC1-205ENST00000559886 RBMXL3Q8N7X1 1067 aaKnown RBP10.96□□□□□ -0.66
HERC1-205ENST00000559886 SCAIQ8N9R8 606 aa10.96□□□□□ -0.66
HERC1-205ENST00000559886 MOSPD2Q8NHP6 518 aa10.96□□□□□ -0.66
HERC1-205ENST00000559886 RHOXF1Q8NHV9 184 aa10.96□□□□□ -0.66
HERC1-205ENST00000559886 MIB2Q96AX9 1013 aa10.96□□□□□ -0.66
HERC1-205ENST00000559886 GPX7Q96SL4 187 aaPredicted RBP10.96□□□□□ -0.66
HERC1-205ENST00000559886 IFT27Q9BW83 186 aa10.96□□□□□ -0.66
HERC1-205ENST00000559886 TAPBPLQ9BX59 468 aa10.96□□□□□ -0.66
HERC1-205ENST00000559886 ASPNQ9BXN1 380 aa10.96□□□□□ -0.66
HERC1-205ENST00000559886 ZDHHC11Q9H8X9 412 aa10.96□□□□□ -0.66
HERC1-205ENST00000559886 ALKBH4Q9NXW9 302 aa10.96□□□□□ -0.66
HERC1-205ENST00000559886 ZNF226Q9NYT6 803 aa10.96□□□□□ -0.66
HERC1-205ENST00000559886 TAS2R5Q9NYW4 299 aa10.96□□□□□ -0.66
HERC1-205ENST00000559886 SEC14L4Q9UDX3 406 aa10.96□□□□□ -0.66
HERC1-205ENST00000559886 BAIAP2Q9UQB8 552 aa10.96□□□□□ -0.66
HERC1-205ENST00000559886 ATMQ13315 3056 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 TMEM8BA6NDV4 472 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 MCIDASD6RGH6 385 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 M0R082 166 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 GABRB1P18505 474 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 PMP22Q01453 160 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 RPL18Q07020 188 aaKnown RBP10.95□□□□□ -0.66
HERC1-205ENST00000559886 CDK5R2Q13319 367 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 SLC10A1Q14973 349 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 DPY19L2P2Q6ZN68 376 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 TMPPEQ6ZT21 453 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 LRRC75AQ8NAA5 344 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 ZNF417Q8TAU3 575 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 TRUB1Q8WWH5 349 aaKnown RBP10.95□□□□□ -0.66
HERC1-205ENST00000559886 ZNF587Q96SQ5 575 aaPredicted RBP10.95□□□□□ -0.66
HERC1-205ENST00000559886 TEX12Q9BXU0 123 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 PRRG3Q9BZD7 231 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 RASSF1Q9NS23 344 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 TVP23BQ9NYZ1 205 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 M0R129 80 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 PLPP3O14495 311 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 MPZL2O60487 215 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 PMS2P2O95744 297 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 HMGN1P05114 100 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 GRK5P34947 590 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 DIO1P49895 249 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 CHN2P52757 468 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 MYBPC1Q00872 1141 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 PMS2P3Q13401 168 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 ALG10Q5BKT4 473 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 LAIR2Q6ISS4 152 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 PTCHD4Q6ZW05 846 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 H1FNTQ75WM6 255 aaPredicted RBP10.95□□□□□ -0.66
HERC1-205ENST00000559886 OR8J1Q8NGP2 316 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 SMPDL3BQ92485 455 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 KLHL15Q96M94 604 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 SLC38A2Q96QD8 506 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 POLDIP3Q9BY77 421 aaKnown RBP10.95□□□□□ -0.66
HERC1-205ENST00000559886 NRIP3Q9NQ35 241 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 SLC6A5Q9Y345 797 aa10.95□□□□□ -0.66
HERC1-205ENST00000559886 A0A0J9YW62 118 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 SULT2B1O00204 365 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 PRKYO43930 277 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 WBP4O75554 376 aaKnown RBP10.94□□□□□ -0.66
HERC1-205ENST00000559886 PPP1R3DO95685 299 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 RPSAP08865 295 aaKnown RBP10.94□□□□□ -0.66
HERC1-205ENST00000559886 GTF2E2P29084 291 aaKnown RBP10.94□□□□□ -0.66
HERC1-205ENST00000559886 RPL4P36578 427 aaKnown RBP10.94□□□□□ -0.66
HERC1-205ENST00000559886 PCYT1AP49585 367 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 SNRPGP62308 76 aaKnown RBP10.94□□□□□ -0.66
HERC1-205ENST00000559886 SNAPC1Q16533 368 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 GGNQ86UU5 652 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 IGFN1Q86VF2 1251 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 CCDC103Q8IW40 242 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 CNIH3Q8TBE1 160 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 APH1BQ8WW43 257 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 MFRPQ9BY79 579 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 NDEL1Q9GZM8 345 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 SLC6A15Q9H2J7 730 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 CHST11Q9NPF2 352 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 AASSQ9UDR5 926 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 B3GNT3Q9Y2A9 372 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 TP53TG5Q9Y2B4 290 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 B3GALT5Q9Y2C3 310 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 BOD1L1Q8NFC6 3051 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 ARPC3O15145 178 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 SURF4O15260 269 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 CD14P08571 375 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 ADORA3P0DMS8 318 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 ZNF24P17028 368 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 POU3F2P20265 443 aaPredicted RBP10.94□□□□□ -0.66
HERC1-205ENST00000559886 STARP49675 285 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 CLDN20P56880 219 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 OR2B6P58173 313 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 SLC35A1P78382 337 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 FOXK2Q01167 660 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 TEKQ02763 1124 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 ZP4Q12836 540 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms