RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 TNFRSF10DQ9UBN6 386 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 PCNX2A6NKB5 2137 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 MASP2O00187 686 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 AIREO43918 545 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 BCL10O95999 233 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 GADD45AP24522 165 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 SDHAP31040 664 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 ATP6V1E1P36543 226 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 DLSTP36957 453 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 PEX19P40855 299 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 WNT4P56705 351 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 CTXN1P60606 82 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 SSX1Q16384 188 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 SGCBQ16585 318 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 TSTQ16762 297 aaKnown RBP11.48□□□□□ -0.57
USP3-213ENST00000559711 PLPPR5Q32ZL2 321 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 KLHL12Q53G59 568 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 EMC4Q5J8M3 183 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 SHFQ7M4L6 423 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 SIRT6Q8N6T7 355 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 SDR9C7Q8NEX9 313 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 OR51G2Q8NGK0 314 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 OR5J2Q8NH18 312 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 RPL3LQ92901 407 aaKnown RBP11.48□□□□□ -0.57
USP3-213ENST00000559711 KLHL1Q9NR64 748 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 ERVK13-1Q9NX77 482 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 TAS2R5Q9NYW4 299 aa11.48□□□□□ -0.57
USP3-213ENST00000559711 LOC101059948A0A1B0GTJ6 334 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 ANKRD33BA6NCL7 494 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 FTCDNL1E5RQL4 147 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 STMND1H3BQB6 276 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 DXOO77932 396 aaKnown RBP11.47□□□□□ -0.57
USP3-213ENST00000559711 AHSA1O95433 338 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 CLUP10909 449 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 ZNF41P51814 821 aaPredicted RBP11.47□□□□□ -0.57
USP3-213ENST00000559711 VBP1P61758 197 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 POU4F2Q12837 409 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 FOXF1Q12946 379 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 IL10RAQ13651 578 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 INPP5JQ15735 1006 aaPredicted RBP11.47□□□□□ -0.57
USP3-213ENST00000559711 GPR139Q6DWJ6 353 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 B3GLCTQ6Y288 498 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 LHFPL3Q86UP9 236 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 TMEM156Q8N614 296 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 ACBD7Q8N6N7 88 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 OR52N1Q8NH53 320 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 POC1BQ8TC44 478 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 RASD2Q96D21 266 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 SGCZQ96LD1 299 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 Q96M85 177 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 NMNAT3Q96T66 252 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 ARHGAP9Q9BRR9 750 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 POTEKPQ9BYX7 375 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 OR11A1Q9GZK7 315 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 IRF2BPLQ9H1B7 796 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 PROK2Q9HC23 129 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 TIMMDC1Q9NPL8 285 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 INPP5EQ9NRR6 644 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 FAM86C1Q9NVL1 165 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 VDAC3Q9Y277 283 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 KNTC1P50748 2209 aa11.47□□□□□ -0.57
USP3-213ENST00000559711 TEX13CA0A0J9YWL9 993 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 OR6C68A6NDL8 312 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 EFNA2O43921 213 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 FZD7O75084 574 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 F13BP05160 661 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 SBK2P0C263 348 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 CPEP16870 476 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 GRPRP30550 384 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 UGT2B10P36537 528 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 CDKN2AP42771 156 aaKnown RBP11.46□□□□□ -0.57
USP3-213ENST00000559711 SLC25A1P53007 311 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 RPS7P62081 194 aaKnown RBP11.46□□□□□ -0.57
USP3-213ENST00000559711 NCS1P62166 190 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 LSM3P62310 102 aaKnown RBP11.46□□□□□ -0.57
USP3-213ENST00000559711 ACSM1Q08AH1 577 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 TPBGQ13641 420 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 MFSD13AQ14CX5 517 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 TIMM50Q3ZCQ8 353 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 SLC35D3Q5M8T2 416 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 OR2G6Q5TZ20 316 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 SLC22A10Q63ZE4 541 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 TMPRSS12Q86WS5 348 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 PLCZ1Q86YW0 608 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 MFSD8Q8NHS3 518 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 NDNFQ8TB73 568 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 ADAMTS17Q8TE56 1095 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 TM9SF4Q92544 642 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 SLC25A36Q96CQ1 311 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 C1GALT1C1Q96EU7 318 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 ASPNQ9BXN1 380 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 OR51E2Q9H255 320 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 ADGRL4Q9HBW9 690 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 HPF1Q9NWY4 346 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 MRPL39Q9NYK5 338 aaKnown RBP11.46□□□□□ -0.57
USP3-213ENST00000559711 FBXL2Q9UKC9 423 aa11.46□□□□□ -0.57
USP3-213ENST00000559711 A0A087WZY1 265 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 SPAARA0A1B0GVQ0 90 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 C12orf71A8MTZ7 269 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms