RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 SLC38A4Q969I6 547 aa13.03□□□□□ -0.32
RPL28-208ENST00000559463 TAAR8Q969N4 342 aa13.03□□□□□ -0.32
RPL28-208ENST00000559463 SLC25A36Q96CQ1 311 aa13.03□□□□□ -0.32
RPL28-208ENST00000559463 CCL19Q99731 98 aa13.03□□□□□ -0.32
RPL28-208ENST00000559463 TAS2R16Q9NYV7 291 aa13.03□□□□□ -0.32
RPL28-208ENST00000559463 NPAP1Q9NZP6 1156 aa13.03□□□□□ -0.32
RPL28-208ENST00000559463 SLC13A4Q9UKG4 626 aa13.03□□□□□ -0.32
RPL28-208ENST00000559463 USP22Q9UPT9 525 aa13.03□□□□□ -0.32
RPL28-208ENST00000559463 CAPN7Q9Y6W3 813 aa13.03□□□□□ -0.32
RPL28-208ENST00000559463 NF1P21359 2839 aa13.03□□□□□ -0.32
RPL28-208ENST00000559463 A0A087WUJ7 227 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 LOC100653049A0A140TA62 436 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 OR5H1A6NKK0 313 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 HS3ST1O14792 307 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 ATP8B1O43520 1251 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 KRT34O76011 436 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 PTNP21246 168 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 CDH12P55289 794 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 ADAM8P78325 824 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 BSPH1Q075Z2 132 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 MMEL1Q495T6 779 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 TMEM225Q6GV28 225 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 CREB3L2Q70SY1 520 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 CCDC80Q76M96 950 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 PATL1Q86TB9 770 aaKnown RBP13.02□□□□□ -0.33
RPL28-208ENST00000559463 RANBP3LQ86VV4 465 aaPredicted RBP13.02□□□□□ -0.33
RPL28-208ENST00000559463 TSPYL5Q86VY4 417 aaPredicted RBP13.02□□□□□ -0.33
RPL28-208ENST00000559463 EPHX4Q8IUS5 362 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 POU5F2Q8N7G0 328 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 OR6T1Q8NGN1 323 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 LILRB1Q8NHL6 650 aaPredicted RBP13.02□□□□□ -0.33
RPL28-208ENST00000559463 SLC47A1Q96FL8 570 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 PIP5K1AQ99755 562 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 TMUB1Q9BVT8 246 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 AMBRA1Q9C0C7 1298 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 EVA1AQ9H8M9 152 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 TMEM27Q9HBJ8 222 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 PARPBPQ9NWS1 579 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 B3GAT1Q9P2W7 334 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 RASD1Q9Y272 281 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 RNF115Q9Y4L5 304 aa13.02□□□□□ -0.33
RPL28-208ENST00000559463 NIPBLQ6KC79 2804 aaeCLIP13.01□□□□□ -0.33
RPL28-208ENST00000559463 TRAV36DV7A0A075B6V5 113 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 CIB4A0PJX0 185 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 DPRXA6NFQ7 191 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 CCT8L1PA6NM43 557 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 SLC22A2O15244 555 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 FMO6PO60774 539 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 VAMP5O95183 116 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 NPPAP01160 153 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 C8BP07358 591 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 CD3EP07766 207 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 HOXC12P31275 282 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 SELENOPP49908 381 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 LGALS3BPQ08380 585 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 FOXD4Q12950 439 aaPredicted RBP13.01□□□□□ -0.33
RPL28-208ENST00000559463 GABRA6Q16445 453 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 FAM69AQ5T7M9 428 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 C9orf135Q5VTT2 229 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 C5orf46Q6UWT4 87 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 AAED1Q7RTV5 226 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 P2RY8Q86VZ1 359 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 RBM45Q8IUH3 476 aaKnown RBP13.01□□□□□ -0.33
RPL28-208ENST00000559463 KDM8Q8N371 416 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 WFDC11Q8NEX6 87 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 KBTBD8Q8NFY9 601 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 OR52N5Q8NH56 324 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 AKAP1Q92667 903 aaKnown RBP eCLIP13.01□□□□□ -0.33
RPL28-208ENST00000559463 NEUROG1Q92886 237 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 PIGTQ969N2 578 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 MCHR1Q99705 422 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 SLCO5A1Q9H2Y9 848 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 ESRP2Q9H6T0 727 aaKnown RBP13.01□□□□□ -0.33
RPL28-208ENST00000559463 NGBQ9NPG2 151 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 UPB1Q9UBR1 384 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 SLC25A15Q9Y619 301 aa13.01□□□□□ -0.33
RPL28-208ENST00000559463 A0A1W2PR80 420 aa13□□□□□ -0.33
RPL28-208ENST00000559463 M0R082 166 aa13□□□□□ -0.33
RPL28-208ENST00000559463 AIM2O14862 343 aa13□□□□□ -0.33
RPL28-208ENST00000559463 CLOCKO15516 846 aa13□□□□□ -0.33
RPL28-208ENST00000559463 OR2T1O43869 369 aa13□□□□□ -0.33
RPL28-208ENST00000559463 LYPD3O95274 346 aa13□□□□□ -0.33
RPL28-208ENST00000559463 BGLAPP02818 100 aa13□□□□□ -0.33
RPL28-208ENST00000559463 THY1P04216 161 aa13□□□□□ -0.33
RPL28-208ENST00000559463 CBLP22681 906 aa13□□□□□ -0.33
RPL28-208ENST00000559463 GTF2E2P29084 291 aaKnown RBP13□□□□□ -0.33
RPL28-208ENST00000559463 GRPRP30550 384 aa13□□□□□ -0.33
RPL28-208ENST00000559463 SLC25A3Q00325 362 aa13□□□□□ -0.33
RPL28-208ENST00000559463 LTBQ06643 244 aa13□□□□□ -0.33
RPL28-208ENST00000559463 ENTPD8Q5MY95 495 aa13□□□□□ -0.33
RPL28-208ENST00000559463 SWT1Q5T5J6 900 aaKnown RBP13□□□□□ -0.33
RPL28-208ENST00000559463 INTS11Q5TA45 600 aaKnown RBP13□□□□□ -0.33
RPL28-208ENST00000559463 ADAM5Q6NVV9 412 aa13□□□□□ -0.33
RPL28-208ENST00000559463 ZNF613Q6PF04 617 aa13□□□□□ -0.33
RPL28-208ENST00000559463 WDR88Q6ZMY6 472 aa13□□□□□ -0.33
RPL28-208ENST00000559463 WDR31Q8NA23 367 aa13□□□□□ -0.33
RPL28-208ENST00000559463 C1orf162Q8NEQ5 155 aaPredicted RBP13□□□□□ -0.33
RPL28-208ENST00000559463 VANGL1Q8TAA9 524 aaPredicted RBP13□□□□□ -0.33
RPL28-208ENST00000559463 ZNF417Q8TAU3 575 aa13□□□□□ -0.33
RPL28-208ENST00000559463 RNF217Q8TC41 542 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms