RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 SLC16A1P53985 500 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 RASGEF1BQ0VAM2 473 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 PDK3Q15120 406 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 GTF2IRD2BQ6EKJ0 949 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 ZNF730Q6ZMV8 503 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 GTF2IRD2Q86UP8 949 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 MED12LQ86YW9 2145 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 CCDC103Q8IW40 242 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 C10orf53Q8N6V4 93 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 SCAIQ8N9R8 606 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 PAPD5Q8NDF8 572 aaKnown RBP19.32■□□□□ 0.68
SNX1-206ENST00000559389 ADPRHL1Q8NDY3 354 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 ZNF417Q8TAU3 575 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 SLCO4A1Q96BD0 722 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 RAB3IPQ96QF0 476 aaPredicted RBP19.32■□□□□ 0.68
SNX1-206ENST00000559389 ZNF587Q96SQ5 575 aaPredicted RBP19.32■□□□□ 0.68
SNX1-206ENST00000559389 TACO1Q9BSH4 297 aaKnown RBP19.32■□□□□ 0.68
SNX1-206ENST00000559389 BCO1Q9HAY6 547 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 CHST11Q9NPF2 352 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 SEC14L4Q9UDX3 406 aa19.32■□□□□ 0.68
SNX1-206ENST00000559389 ZNF629Q9UEG4 869 aaPredicted RBP19.32■□□□□ 0.68
SNX1-206ENST00000559389 HTR3EA5X5Y0 456 aa19.31■□□□□ 0.68
SNX1-206ENST00000559389 CH25HO95992 272 aa19.31■□□□□ 0.68
SNX1-206ENST00000559389 CBLP22681 906 aa19.31■□□□□ 0.68
SNX1-206ENST00000559389 OPRM1P35372 400 aa19.31■□□□□ 0.68
SNX1-206ENST00000559389 KIR2DL2P43627 348 aaPredicted RBP19.31■□□□□ 0.68
SNX1-206ENST00000559389 CTBP2P56545 445 aa19.31■□□□□ 0.68
SNX1-206ENST00000559389 SIRPAP78324 504 aa19.31■□□□□ 0.68
SNX1-206ENST00000559389 CDSNQ15517 529 aa19.31■□□□□ 0.68
SNX1-206ENST00000559389 PODNL1Q6PEZ8 512 aa19.31■□□□□ 0.68
SNX1-206ENST00000559389 XKRXQ6PP77 449 aa19.31■□□□□ 0.68
SNX1-206ENST00000559389 MBOAT2Q6ZWT7 520 aa19.31■□□□□ 0.68
SNX1-206ENST00000559389 FAM214BQ7L5A3 538 aa19.31■□□□□ 0.68
SNX1-206ENST00000559389 MAMDC2Q7Z304 686 aaPredicted RBP19.31■□□□□ 0.68
SNX1-206ENST00000559389 LIX1LQ8IVB5 337 aa19.31■□□□□ 0.68
SNX1-206ENST00000559389 NRMQ8IXM6 262 aa19.31■□□□□ 0.68
SNX1-206ENST00000559389 RNF113BQ8IZP6 322 aaKnown RBP19.31■□□□□ 0.68
SNX1-206ENST00000559389 RELL2Q8NC24 303 aaPredicted RBP19.31■□□□□ 0.68
SNX1-206ENST00000559389 SGTBQ96EQ0 304 aa19.31■□□□□ 0.68
SNX1-206ENST00000559389 ASPNQ9BXN1 380 aa19.31■□□□□ 0.68
SNX1-206ENST00000559389 CCM2LQ9NUG4 571 aaPredicted RBP19.31■□□□□ 0.68
SNX1-206ENST00000559389 MRPL39Q9NYK5 338 aaKnown RBP19.31■□□□□ 0.68
SNX1-206ENST00000559389 C6orf203Q9P0P8 240 aaPredicted RBP19.31■□□□□ 0.68
SNX1-206ENST00000559389 ZNF229Q9UJW7 825 aa19.31■□□□□ 0.68
SNX1-206ENST00000559389 B3GALT5Q9Y2C3 310 aa19.31■□□□□ 0.68
SNX1-206ENST00000559389 MYO7BQ6PIF6 2116 aa19.3■□□□□ 0.68
SNX1-206ENST00000559389 DVL2O14641 736 aa19.3■□□□□ 0.68
SNX1-206ENST00000559389 FKBP6O75344 327 aa19.3■□□□□ 0.68
SNX1-206ENST00000559389 OR7A10O76100 309 aa19.3■□□□□ 0.68
SNX1-206ENST00000559389 IFI30P13284 250 aa19.3■□□□□ 0.68
SNX1-206ENST00000559389 NQO1P15559 274 aaKnown RBP19.3■□□□□ 0.68
SNX1-206ENST00000559389 LIMS1P48059 325 aa19.3■□□□□ 0.68
SNX1-206ENST00000559389 SLC17A1Q14916 467 aa19.3■□□□□ 0.68
SNX1-206ENST00000559389 SEC23BQ15437 767 aa19.3■□□□□ 0.68
SNX1-206ENST00000559389 EEF1A1P5Q5VTE0 462 aa19.3■□□□□ 0.68
SNX1-206ENST00000559389 OR2T5Q6IEZ7 315 aa19.3■□□□□ 0.68
SNX1-206ENST00000559389 VWA1Q6PCB0 445 aa19.3■□□□□ 0.68
SNX1-206ENST00000559389 OR2T29Q8NH02 315 aa19.3■□□□□ 0.68
SNX1-206ENST00000559389 OR52J3Q8NH60 311 aa19.3■□□□□ 0.68
SNX1-206ENST00000559389 LIPHQ8WWY8 451 aa19.3■□□□□ 0.68
SNX1-206ENST00000559389 VNN3Q9NY84 501 aa19.3■□□□□ 0.68
SNX1-206ENST00000559389 RASD1Q9Y272 281 aa19.3■□□□□ 0.68
SNX1-206ENST00000559389 EMC9Q9Y3B6 208 aa19.3■□□□□ 0.68
SNX1-206ENST00000559389 LYVE1Q9Y5Y7 322 aa19.3■□□□□ 0.68
SNX1-206ENST00000559389 SH3PXD2BA1X283 911 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 ZNF724A8MTY0 619 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 ASAH2BP0C7U1 165 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 BMP5P22003 454 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 ACTR3P61158 418 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 PRKCDQ05655 676 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 POU4F3Q15319 338 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 TBPL2Q6SJ96 375 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 H1FNTQ75WM6 255 aaPredicted RBP19.29■□□□□ 0.68
SNX1-206ENST00000559389 TUSC5Q8IXB3 177 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 CNEP1R1Q8N9A8 125 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 OR4K5Q8NGD3 323 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 OR4C15Q8NGM1 316 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 OR6K3Q8NGY3 331 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 OR5J2Q8NH18 312 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 LILRB4Q8NHJ6 448 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 BPIFA2Q96DR5 249 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 DUS3LQ96G46 650 aaKnown RBP19.29■□□□□ 0.68
SNX1-206ENST00000559389 SF3B5Q9BWJ5 86 aaKnown RBP19.29■□□□□ 0.68
SNX1-206ENST00000559389 NANSQ9NR45 359 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 EMC3Q9P0I2 261 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 B3GAT1Q9P2W7 334 aa19.29■□□□□ 0.68
SNX1-206ENST00000559389 RELNP78509 3460 aa19.28■□□□□ 0.68
SNX1-206ENST00000559389 FAM90A27PA6NNH2 459 aa19.28■□□□□ 0.68
SNX1-206ENST00000559389 KRT36O76013 467 aa19.28■□□□□ 0.68
SNX1-206ENST00000559389 VAMP5O95183 116 aa19.28■□□□□ 0.68
SNX1-206ENST00000559389 YES1P07947 543 aa19.28■□□□□ 0.68
SNX1-206ENST00000559389 HMGA2P52926 109 aa19.28■□□□□ 0.68
SNX1-206ENST00000559389 KPNB1Q14974 876 aaKnown RBP19.28■□□□□ 0.68
SNX1-206ENST00000559389 SLC25A35Q3KQZ1 300 aa19.28■□□□□ 0.68
SNX1-206ENST00000559389 TMEM201Q5SNT2 666 aa19.28■□□□□ 0.68
SNX1-206ENST00000559389 LRRC17Q8N6Y2 441 aa19.28■□□□□ 0.68
SNX1-206ENST00000559389 OR9K2Q8NGE7 335 aa19.28■□□□□ 0.68
SNX1-206ENST00000559389 CA5BP1Q8WTZ4 195 aa19.28■□□□□ 0.68
SNX1-206ENST00000559389 STARD4Q96DR4 205 aa19.28■□□□□ 0.68
SNX1-206ENST00000559389 ALPK1Q96QP1 1244 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms