RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 BMP5P22003 454 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 RRM2P31350 389 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 RBM34P42696 430 aaKnown RBP9.68□□□□□ -0.86
TPM1-217ENST00000559108 GPR4P46093 362 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 SLC16A1P53985 500 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 CSNK2A1P68400 391 aaPredicted RBP9.68□□□□□ -0.86
TPM1-217ENST00000559108 SLC35A1P78382 337 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 SPIBQ01892 262 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 LGALS3BPQ08380 585 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 ST3GAL3Q11203 375 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 DGCR6Q14129 220 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 SLC17A1Q14916 467 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 KPNB1Q14974 876 aaKnown RBP9.68□□□□□ -0.86
TPM1-217ENST00000559108 ZSCAN26Q16670 478 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 EXOC3L2Q2M3D2 409 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 C1orf146Q5VVC0 180 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 TMEM211Q6ICI0 200 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 TTC33Q6PID6 262 aaPredicted RBP9.68□□□□□ -0.86
TPM1-217ENST00000559108 PAQR6Q6TCH4 344 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 CHMP1BQ7LBR1 199 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 P4HA3Q7Z4N8 544 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 HS3ST5Q8IZT8 346 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 OR13C2Q8NGS9 318 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 MOSPD2Q8NHP6 518 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 SSC4DQ8WTU2 575 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 ACOT11Q8WXI4 607 aaPredicted RBP9.68□□□□□ -0.86
TPM1-217ENST00000559108 LRGUKQ96M69 825 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 CHID1Q9BWS9 393 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 ENKD1Q9H0I2 346 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 OPN3Q9H1Y3 402 aaPredicted RBP9.68□□□□□ -0.86
TPM1-217ENST00000559108 MMADHCQ9H3L0 296 aaPredicted RBP9.68□□□□□ -0.86
TPM1-217ENST00000559108 DENND2DQ9H6A0 471 aaPredicted RBP9.68□□□□□ -0.86
TPM1-217ENST00000559108 BCO1Q9HAY6 547 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 NTN4Q9HB63 628 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 CHST11Q9NPF2 352 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 CCM2LQ9NUG4 571 aaPredicted RBP9.68□□□□□ -0.86
TPM1-217ENST00000559108 TAS2R5Q9NYW4 299 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 JKAMPQ9P055 326 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 AURKCQ9UQB9 309 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 LYVE1Q9Y5Y7 322 aa9.68□□□□□ -0.86
TPM1-217ENST00000559108 PTPN13Q12923 2485 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 PRR14LQ5THK1 2151 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 SH3PXD2BA1X283 911 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 PLPP3O14495 311 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 DNPH1O43598 174 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 TRAF3IP2O43734 574 aaPredicted RBP9.67□□□□□ -0.86
TPM1-217ENST00000559108 FKBP6O75344 327 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 TIPRLO75663 272 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 OR7A10O76100 309 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 TSPAN19P0C672 248 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 RAP2AP10114 183 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 IFI30P13284 250 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 NQO1P15559 274 aaKnown RBP9.67□□□□□ -0.86
TPM1-217ENST00000559108 CTSSP25774 331 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 FKBP2P26885 142 aaKnown RBP9.67□□□□□ -0.86
TPM1-217ENST00000559108 CCKARP32238 428 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 OMPP47874 163 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 FOXG1P55316 489 aaPredicted RBP9.67□□□□□ -0.86
TPM1-217ENST00000559108 CTBP2P56545 445 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 FXYD6P3P58550 94 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 ACTR3P61158 418 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 PRKCDQ05655 676 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 RASGEF1BQ0VAM2 473 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 SNTB1Q13884 538 aaKnown RBP9.67□□□□□ -0.86
TPM1-217ENST00000559108 FGD3Q5JSP0 725 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 PDSS1Q5T2R2 415 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 HIST2H2BCQ6DN03 193 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 ZNF770Q6IQ21 691 aaPredicted RBP9.67□□□□□ -0.86
TPM1-217ENST00000559108 HMBOX1Q6NT76 420 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 ZNF474Q6S9Z5 364 aaPredicted RBP9.67□□□□□ -0.86
TPM1-217ENST00000559108 MBOAT2Q6ZWT7 520 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 FAM214BQ7L5A3 538 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 ZER1Q7Z7L7 766 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 ZNF808Q8N4W9 903 aaPredicted RBP9.67□□□□□ -0.86
TPM1-217ENST00000559108 CNEP1R1Q8N9A8 125 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 LRRC75AQ8NAA5 344 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 OR4K5Q8NGD3 323 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 OR9K2Q8NGE7 335 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 OR9Q2Q8NGE9 314 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 OR6S1Q8NH40 331 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 LILRB4Q8NHJ6 448 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 SGTBQ96EQ0 304 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 DUS3LQ96G46 650 aaKnown RBP9.67□□□□□ -0.86
TPM1-217ENST00000559108 GMPPAQ96IJ6 420 aaPredicted RBP9.67□□□□□ -0.86
TPM1-217ENST00000559108 FAM46AQ96IP4 442 aaKnown RBP9.67□□□□□ -0.86
TPM1-217ENST00000559108 PSMG3-AS1Q96PY0 264 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 PRRG4Q9BZD6 226 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 SLC19A3Q9BZV2 496 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 C12orf49Q9H741 205 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 PAQR5Q9NXK6 330 aaPredicted RBP9.67□□□□□ -0.86
TPM1-217ENST00000559108 MRPL39Q9NYK5 338 aaKnown RBP9.67□□□□□ -0.86
TPM1-217ENST00000559108 SELENONQ9NZV5 590 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 STOML1Q9UBI4 398 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 PRSS50Q9UI38 385 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 MAGED1Q9Y5V3 778 aaPredicted RBP9.67□□□□□ -0.86
TPM1-217ENST00000559108 FLVCR1Q9Y5Y0 555 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 U3KQV3 271 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 COL12A1Q99715 3063 aa9.67□□□□□ -0.86
TPM1-217ENST00000559108 ERICH4A6NGS2 130 aa9.66□□□□□ -0.86
TPM1-217ENST00000559108 HSPB2A8KAH6 182 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms